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Volume 443, Issue 2

April 2012

All Issues

Cover Image

Cover Image
Front Matter
Table of Contents
Editorial Board

ISSN 0264-6021

EISSN 1470-8728

In this Issue

Review articles
Accelerated Publications
Research articles
Correction articles
Commentaries

Review articles

Steroid-like signalling by interferons: making sense of specific gene activation by cytokines

Howard M. Johnson; Ezra N. Noon-Song; Kaisa Kemppainen; Chulbul M. Ahmed

Biochem J (2012) 443 (2): 329–338.

Abstract

View Articletitled, Steroid-like signalling by interferons: making sense of specific gene activation by cytokines

Supplementary data

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Virology and molecular pathogenesis of HPV (human papillomavirus)associated oropharyngeal squamous cell carcinoma

Daniel L. Miller; Michael D. Puricelli; M. Sharon Stack

Biochem J (2012) 443 (2): 339–353.

Abstract

View Articletitled, Virology and molecular pathogenesis of HPV (human papillomavirus)associated oropharyngeal squamous cell carcinoma

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Accelerated Publications

An inactivating caspase 11 passenger mutation originating from the 129 murine strain in mice targeted for c-IAP1

Niall S. Kenneth; J. Michael Younger; Elizabeth D. Hughes; Danielle Marcotte; Philip A. Barker; Thomas L. Saunders; Colin S. Duckett

Biochem J (2012) 443 (2): 355–359.

Abstract

View Articletitled, An inactivating caspase 11 passenger mutation originating from the 129 murine strain in mice targeted for c-IAP1

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Research articles

Proteoglycans of uterine fibroids and keloid scars: similarity in their proteoglycan composition

David A. Carrino; Sam Mesiano; Nichole M. Barker; William W. Hurd; Arnold I. Caplan

Biochem J (2012) 443 (2): 361–368.

Abstract

View Articletitled, Proteoglycans of uterine fibroids and keloid scars: similarity in their proteoglycan composition

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A novel lectin from Agrocybe aegerita shows high binding selectivity for terminal N-acetylglucosamine

Shuai Jiang; Yijie Chen; Man Wang; Yalin Yin; Yongfu Pan; Bianli Gu; Guojun Yu; Yamu Li; Barry Hon Cheung Wong; Yi Liang; Hui Sun

Biochem J (2012) 443 (2): 369–378.

Abstract

View Articletitled, A novel lectin from Agrocybe aegerita shows high binding selectivity for terminal N-acetylglucosamine

Supplementary data

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The non-steroidal anti-inflammatory drug indomethacin activates the eIF2α kinase PKR, causing a translational block in human colorectal cancer cells

Claudia Brunelli; Carla Amici; Mara Angelini; Chiara Fracassi; Giuseppe Belardo; M. Gabriella Santoro

Biochem J (2012) 443 (2): 379–386.

Abstract

View Articletitled, The non-steroidal anti-inflammatory drug indomethacin activates the eIF2α kinase PKR, causing a translational block in human colorectal cancer cells

Supplementary data

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The Golgi-associated long coiled-coil protein NECC1 participates in the control of the regulated secretory pathway in PC12 cells

David Cruz-García; Alberto Díaz-Ruiz; Yoana Rabanal-Ruiz; Juan R. Peinado; Francisco Gracia-Navarro; Justo P. Castaño; Maité Montero-Hadjadje; Marie-Christine Tonon; Hubert Vaudry; Youssef Anouar; Rafael Vázquez-Martínez; María M. Malagón

Biochem J (2012) 443 (2): 387–396.

Abstract

View Articletitled, The Golgi-associated long coiled-coil protein NECC1 participates in the control of the regulated secretory pathway in PC12 cells

Supplementary data

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The antioxidative effect of de novo generated vitamin B₆ in Plasmodium falciparum validated by protein interference

Julia Knöckel; Ingrid B. Müller; Sabine Butzloff; Bärbel Bergmann; Rolf D. Walter; Carsten Wrenger

Biochem J (2012) 443 (2): 397–405.

Abstract

View Articletitled, The antioxidative effect of de novo generated vitamin B6 in Plasmodium falciparum validated by protein interference

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Transforming growth factor β1 represses proximal tubular cell microRNA-192 expression through decreased hepatocyte nuclear factor DNA binding

Robert H. Jenkins; John Martin; Aled O. Phillips; Timothy Bowen; Donald J. Fraser

Biochem J (2012) 443 (2): 407–416.

Abstract

View Articletitled, Transforming growth factor β1 represses proximal tubular cell microRNA-192 expression through decreased hepatocyte nuclear factor DNA binding

Supplementary data

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Regulation of the intersubunit ammonia tunnel in Mycobacterium tuberculosis glutamine-dependent NAD⁺ synthetase

Watchalee Chuenchor; Tzanko I. Doukov; Melissa Resto; Andrew Chang; Barbara Gerratana

Biochem J (2012) 443 (2): 417–426.

Abstract

View Articletitled, Regulation of the intersubunit ammonia tunnel in Mycobacterium tuberculosis glutamine-dependent NAD+ synthetase

Supplementary data

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Crystal structure and functional characterization of a glucosamine-6-phosphate N-acetyltransferase from Arabidopsis thaliana

Heike Riegler; Thomas Herter; Irina Grishkovskaya; Anja Lude; Malgorzata Ryngajllo; Marie E. Bolger; Bernd Essigmann; Björn Usadel

Biochem J (2012) 443 (2): 427–437.

Abstract

View Articletitled, Crystal structure and functional characterization of a glucosamine-6-phosphate N-acetyltransferase from Arabidopsis thaliana

Supplementary data

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γ-Enolase C-terminal peptide promotes cell survival and neurite outgrowth by activation of the PI3K/Akt and MAPK/ERK signalling pathways

Anja Hafner; Nataša Obermajer; Janko Kos

Biochem J (2012) 443 (2): 439–450.

Abstract

View Articletitled, γ-Enolase C-terminal peptide promotes cell survival and neurite outgrowth by activation of the PI3K/Akt and MAPK/ERK signalling pathways

Supplementary data

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Involvement of PGE₂ and the cAMP signalling pathway in the up-regulation of COX-2 and mPGES-1 expression in LPS-activated macrophages

Manuel D. Díaz-Muñoz; Inés C. Osma-García; Manuel Fresno; Miguel A. Iñiguez

Biochem J (2012) 443 (2): 451–461.

Abstract

View Articletitled, Involvement of PGE2 and the cAMP signalling pathway in the up-regulation of COX-2 and mPGES-1 expression in LPS-activated macrophages

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CNGA3 is expressed in inner ear hair cells and binds to an intracellular C-terminus domain of EMILIN1

Dakshnamurthy Selvakumar; Marian J. Drescher; Jayme R. Dowdall; Khalid M. Khan; James S. Hatfield; Neeliyath A. Ramakrishnan; Dennis G. Drescher

Biochem J (2012) 443 (2): 463–476.

Abstract

View Articletitled, CNGA3 is expressed in inner ear hair cells and binds to an intracellular C-terminus domain of EMILIN1

Supplementary data

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A naturally occurring nonapeptide functionally compensates for the CP1 domain of leucyl-tRNA synthetase to modulate aminoacylation activity

Min Tan; Wei Yan; Ru-Juan Liu; Meng Wang; Xin Chen; Xiao-Long Zhou; En-Duo Wang

Biochem J (2012) 443 (2): 477–484.

Abstract

View Articletitled, A naturally occurring nonapeptide functionally compensates for the CP1 domain of leucyl-tRNA synthetase to modulate aminoacylation activity

Supplementary data

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3′-5′ Phosphoadenosine phosphate is an inhibitor of PARP-1 and a potential mediator of the lithium-dependent inhibition of PARP-1 in vivo

Elie Toledano; Vasily Ogryzko; Antoine Danchin; Daniel Ladant; Undine Mechold

Biochem J (2012) 443 (2): 485–490.

Abstract

View Articletitled, 3′-5′ Phosphoadenosine phosphate is an inhibitor of PARP-1 and a potential mediator of the lithium-dependent inhibition of PARP-1 in vivo

Supplementary data

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Fibulin-5 binds urokinase-type plasminogen activator and mediates urokinase-stimulated β1-integrin-dependent cell migration

Alexander Kapustin; Victoria Stepanova; Natalia Aniol; Douglas B. Cines; Alexei Poliakov; Serge Yarovoi; Tatiana Lebedeva; Robin Wait; Grigory Ryzhakov; Yelena Parfyonova; Yaroslav Gursky; Hiromi Yanagisawa; Mikhail Minashkin; Robert Beabealashvilli; Alexander Vorotnikov; Alex Bobik; Vsevolod Tkachuk

Biochem J (2012) 443 (2): 491–503.

Abstract

View Articletitled, Fibulin-5 binds urokinase-type plasminogen activator and mediates urokinase-stimulated β1-integrin-dependent cell migration

Supplementary data

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Oxygen activation in neuronal NO synthase: resolving the consecutive mono-oxygenation steps

Davide Papale; Chiara Bruckmann; Ben Gazur; Caroline S. Miles; Christopher G. Mowat; Simon Daff

Biochem J (2012) 443 (2): 505–514.

Abstract

View Articletitled, Oxygen activation in neuronal NO synthase: resolving the consecutive mono-oxygenation steps

Supplementary data

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Calcium/calmodulin inhibition of the Arabidopsis BRASSINOSTEROID-INSENSITIVE 1 receptor kinase provides a possible link between calcium and brassinosteroid signalling

Man-Ho Oh; Hyoung Seok Kim; Xia Wu; Steven D. Clouse; Raymond E. Zielinski; Steven C. Huber

Biochem J (2012) 443 (2): 515–523.

Abstract

View Articletitled, Calcium/calmodulin inhibition of the Arabidopsis BRASSINOSTEROID-INSENSITIVE 1 receptor kinase provides a possible link between calcium and brassinosteroid signalling

Supplementary data

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Green tea polyphenol EGCG induces lipid-raft clustering and apoptotic cell death by activating protein kinase Cδ and acid sphingomyelinase through a 67 kDa laminin receptor in multiple myeloma cells

Shuntaro Tsukamoto; Keisuke Hirotsu; Motofumi Kumazoe; Yoko Goto; Kaori Sugihara; Takafumi Suda; Yukari Tsurudome; Takashi Suzuki; Shuya Yamashita; Yoonhee Kim; Yuhui Huang; Koji Yamada; Hirofumi Tachibana

Biochem J (2012) 443 (2): 525–534.

Abstract

View Articletitled, Green tea polyphenol EGCG induces lipid-raft clustering and apoptotic cell death by activating protein kinase Cδ and acid sphingomyelinase through a 67 kDa laminin receptor in multiple myeloma cells

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Novel structural arrangement of nematode cystathionine β-synthases: characterization of Caenorhabditis elegans CBS-1

Roman Vozdek; Aleš Hnízda; Jakub Krijt; Marta Kostrouchová; Viktor Kožich

Biochem J (2012) 443 (2): 535–547.

Abstract

View Articletitled, Novel structural arrangement of nematode cystathionine β-synthases: characterization of Caenorhabditis elegans CBS-1

Supplementary data

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First identification of small-molecule inhibitors of Pontin by combining virtual screening and enzymatic assay

Judith Elkaim; Michel Castroviejo; Driss Bennani; Said Taouji; Nathalie Allain; Michel Laguerre; Jean Rosenbaum; Jean Dessolin; Patrick Lestienne

Biochem J (2012) 443 (2): 549–559.

Abstract

View Articletitled, First identification of small-molecule inhibitors of Pontin by combining virtual screening and enzymatic assay

Supplementary data

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Regulation of human microsomal prostaglandin E synthase-1 by IL-1β requires a distal enhancer element with a unique role for C/EBPβ

Jewell N. Walters; Justin S. Bickford; Kimberly J. Newsom; Dawn E. Beachy; Sarah J. Barilovits; John-David Herlihy; Harry S. Nick

Biochem J (2012) 443 (2): 561–571.

Abstract

View Articletitled, Regulation of human microsomal prostaglandin E synthase-1 by IL-1β requires a distal enhancer element with a unique role for C/EBPβ

Supplementary data

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Ribonucleoprotein Y-box-binding protein-1 regulates mitochondrial oxidative phosphorylation (OXPHOS) protein expression after serum stimulation through binding to OXPHOS mRNA

Shinya Matsumoto; Takeshi Uchiumi; Hiroyuki Tanamachi; Toshiro Saito; Mikako Yagi; Shinya Takazaki; Tomotake Kanki; Dongchon Kang

Biochem J (2012) 443 (2): 573–584.

Abstract

View Articletitled, Ribonucleoprotein Y-box-binding protein-1 regulates mitochondrial oxidative phosphorylation (OXPHOS) protein expression after serum stimulation through binding to OXPHOS mRNA

Supplementary data

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Correction articles

Targeting Lyn tyrosine kinase through protein fusions encompassing motifs of Cbp (Csk-binding protein) and the SOCS box of SOCS1

R. J. Whiting; C. J. Payne; J. Satiaputra; N. Kucera; T. W. Qiu; S. Irtegun; N. J. Gunn; N. S. Slavova-Azmanova; T. D. Mulhern; E. Ingley

Biochem J (2012) 443 (2): 585.

Extract

View Articletitled, Targeting Lyn tyrosine kinase through protein fusions encompassing motifs of Cbp (Csk-binding protein) and the SOCS box of SOCS1

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Commentaries

Mousing around with caspases and IAPs

Robert C. Rickert; Guy S. Salvesen; Carl F. Ware

Biochem J (2012) 443 (2): e1–e2.

Abstract

View Articletitled, Mousing around with caspases and IAPs

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Biochemical and structural impact of two novel missense mutations in cystathionine β-synthase gene associated with homocystinuria

AMP-activated protein kinase can be allosterically activated by ADP but AMP remains the key activating ligand

Activin E is a transforming growth factor β ligand that signals specifically through activin receptor-like kinase 7

Correction: Proteasome and thiol involvement in quality control of glycosylphosphatidylinositol anchor addition

Expression of Concern: Protease-activated receptor-2 promotes kidney tubular epithelial inflammation by inhibiting autophagy via the PI3K/Akt/mTOR signalling pathway

Review articles

Steroid-like signalling by interferons: making sense of specific gene activation by cytokines

Virology and molecular pathogenesis of HPV (human papillomavirus)associated oropharyngeal squamous cell carcinoma

Accelerated Publications

An inactivating caspase 11 passenger mutation originating from the 129 murine strain in mice targeted for c-IAP1

Research articles

Proteoglycans of uterine fibroids and keloid scars: similarity in their proteoglycan composition

A novel lectin from Agrocybe aegerita shows high binding selectivity for terminal N-acetylglucosamine

The non-steroidal anti-inflammatory drug indomethacin activates the eIF2α kinase PKR, causing a translational block in human colorectal cancer cells

The Golgi-associated long coiled-coil protein NECC1 participates in the control of the regulated secretory pathway in PC12 cells

The antioxidative effect of de novo generated vitamin B₆ in Plasmodium falciparum validated by protein interference

Transforming growth factor β1 represses proximal tubular cell microRNA-192 expression through decreased hepatocyte nuclear factor DNA binding

Regulation of the intersubunit ammonia tunnel in Mycobacterium tuberculosis glutamine-dependent NAD⁺ synthetase

Crystal structure and functional characterization of a glucosamine-6-phosphate N-acetyltransferase from Arabidopsis thaliana

γ-Enolase C-terminal peptide promotes cell survival and neurite outgrowth by activation of the PI3K/Akt and MAPK/ERK signalling pathways

Involvement of PGE₂ and the cAMP signalling pathway in the up-regulation of COX-2 and mPGES-1 expression in LPS-activated macrophages

CNGA3 is expressed in inner ear hair cells and binds to an intracellular C-terminus domain of EMILIN1

A naturally occurring nonapeptide functionally compensates for the CP1 domain of leucyl-tRNA synthetase to modulate aminoacylation activity

3′-5′ Phosphoadenosine phosphate is an inhibitor of PARP-1 and a potential mediator of the lithium-dependent inhibition of PARP-1 in vivo

Fibulin-5 binds urokinase-type plasminogen activator and mediates urokinase-stimulated β1-integrin-dependent cell migration

Oxygen activation in neuronal NO synthase: resolving the consecutive mono-oxygenation steps

Calcium/calmodulin inhibition of the Arabidopsis BRASSINOSTEROID-INSENSITIVE 1 receptor kinase provides a possible link between calcium and brassinosteroid signalling

Green tea polyphenol EGCG induces lipid-raft clustering and apoptotic cell death by activating protein kinase Cδ and acid sphingomyelinase through a 67 kDa laminin receptor in multiple myeloma cells

Novel structural arrangement of nematode cystathionine β-synthases: characterization of Caenorhabditis elegans CBS-1

First identification of small-molecule inhibitors of Pontin by combining virtual screening and enzymatic assay

Regulation of human microsomal prostaglandin E synthase-1 by IL-1β requires a distal enhancer element with a unique role for C/EBPβ

Ribonucleoprotein Y-box-binding protein-1 regulates mitochondrial oxidative phosphorylation (OXPHOS) protein expression after serum stimulation through binding to OXPHOS mRNA

Correction articles

Targeting Lyn tyrosine kinase through protein fusions encompassing motifs of Cbp (Csk-binding protein) and the SOCS box of SOCS1

Commentaries

Mousing around with caspases and IAPs

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