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Volume 449, Issue 3

February 2013

All Issues

Cover Image

Cover Image
Front Matter
Table of Contents
Editorial Board

ISSN 0264-6021

EISSN 1470-8728

In this Issue

Review articles
Research articles

Review articles

Organizing the genome with H2A histone variants

Catherine B. Millar

Biochem J (2013) 449 (3): 567–579.

Abstract

View Articletitled, Organizing the genome with H2A histone variants

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Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Romain A. Studer; Benoit H. Dessailly; Christine A. Orengo

Biochem J (2013) 449 (3): 581–594.

Abstract

View Articletitled, Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

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Research articles

nde1 deletion improves mitochondrial DNA maintenance in Saccharomyces cerevisiae coenzyme Q mutants

Fernando Gomes; Erich B. Tahara; Cleverson Busso; Alicia J. Kowaltowski; Mario H. Barros

Biochem J (2013) 449 (3): 595–603.

Abstract

View Articletitled, nde1 deletion improves mitochondrial DNA maintenance in Saccharomyces cerevisiae coenzyme Q mutants

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Regulation of adipogenesis by cytoskeleton remodelling is facilitated by acetyltransferase MEC-17-dependent acetylation of α-tubulin

Wulin Yang; Xiangxiang Guo; Shermaine Thein; Feng Xu; Shigeki Sugii; Peter W. Baas; George K. Radda; Weiping Han

Biochem J (2013) 449 (3): 605–612.

Abstract

View Articletitled, Regulation of adipogenesis by cytoskeleton remodelling is facilitated by acetyltransferase MEC-17-dependent acetylation of α-tubulin

Supplementary data

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The CARD plays a critical role in ASC foci formation and inflammasome signalling

Martina Proell; Motti Gerlic; Peter D. Mace; John C. Reed; Stefan J. Riedl

Biochem J (2013) 449 (3): 613–621.

Abstract

View Articletitled, The CARD plays a critical role in ASC foci formation and inflammasome signalling

Supplementary data

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ADP-ribose polymer depletion leads to nuclear Ctcf re-localization and chromatin rearrangement

Tiziana Guastafierro; Angela Catizone; Roberta Calabrese; Michele Zampieri; Oliviano Martella; Maria Giulia Bacalini; Anna Reale; Maria Di Girolamo; Margherita Miccheli; Dawn Farrar; Elena Klenova; Fabio Ciccarone; Paola Caiafa

Biochem J (2013) 449 (3): 623–630.

Abstract

View Articletitled, ADP-ribose polymer depletion leads to nuclear Ctcf re-localization and chromatin rearrangement

Supplementary data

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Structure and function of the PorB porin from disseminating Neisseria gonorrhoeae

Kornelius Zeth; Vera Kozjak-Pavlovic; Michaela Faulstich; Martin Fraunholz; Robert Hurwitz; Oliver Kepp; Thomas Rudel

Biochem J (2013) 449 (3): 631–642.

Abstract

View Articletitled, Structure and function of the PorB porin from disseminating Neisseria gonorrhoeae

Supplementary data

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A novel method for purification of polymerizable tubulin with a high content of the acetylated isotype

Agustín Carbajal; María E. Chesta; C. Gastón Bisig; Carlos A. Arce

Biochem J (2013) 449 (3): 643–648.

Abstract

View Articletitled, A novel method for purification of polymerizable tubulin with a high content of the acetylated isotype

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Molecular mechanisms underlying the interaction of protein phosphatase-1c with ASPP proteins

Tamara D. Skene-Arnold; Hue Anh Luu; R. Glen Uhrig; Veerle De Wever; Mhairi Nimick; Jason Maynes; Andrea Fong; Michael N. G. James; Laura Trinkle-Mulcahy; Greg B. Moorhead; Charles F. B. Holmes

Biochem J (2013) 449 (3): 649–659.

Abstract

View Articletitled, Molecular mechanisms underlying the interaction of protein phosphatase-1c with ASPP proteins

Supplementary data

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Sphingosine 1-phosphate induces filopodia formation through S1PR2 activation of ERM proteins

K. Alexa Orr Gandy; Daniel Canals; Mohamad Adada; Masayuki Wada; Patrick Roddy; Ashley J. Snider; Yusuf A. Hannun; Lina M. Obeid

Biochem J (2013) 449 (3): 661–672.

Abstract

View Articletitled, Sphingosine 1-phosphate induces filopodia formation through S1PR2 activation of ERM proteins

Supplementary data

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Rfa2 is specifically dephosphorylated by Pph3 in Candida albicans

Haitao Wang; Jiaxin Gao; Ada Hang-Heng Wong; Kangdi Hu; Wanjie Li; Yue Wang; Jianli Sang

Biochem J (2013) 449 (3): 673–681.

Abstract

View Articletitled, Rfa2 is specifically dephosphorylated by Pph3 in Candida albicans

Supplementary data

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Structural and functional characterization of the Staphylococcus aureus virulence factor and vaccine candidate FhuD2

Paolo Mariotti; Enrico Malito; Marco Biancucci; Paola Lo Surdo; Ravi P. N. Mishra; Vincenzo Nardi-Dei; Silvana Savino; Mikkel Nissum; Glen Spraggon; Guido Grandi; Fabio Bagnoli; Matthew J. Bottomley

Biochem J (2013) 449 (3): 683–693.

Abstract

View Articletitled, Structural and functional characterization of the Staphylococcus aureus virulence factor and vaccine candidate FhuD2

Supplementary data

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The dynamic action of SecA during the initiation of protein translocation

Vicki A. M. Gold; Sarah Whitehouse; Alice Robson; Ian Collinson

Biochem J (2013) 449 (3): 695–705.

Abstract

View Articletitled, The dynamic action of SecA during the initiation of protein translocation

Supplementary data

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DNA-binding regulates site-specific ubiquitination of IRF-1

Vivien Landré; Emmanuelle Pion; Vikram Narayan; Dimitris P. Xirodimas; Kathryn L. Ball

Biochem J (2013) 449 (3): 707–717.

Abstract

View Articletitled, DNA-binding regulates site-specific ubiquitination of IRF-1

Supplementary data

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Rapid purification of ribosomal particles assembled on histone H4 mRNA: a new method based on mRNA–DNA chimaeras

Lydia Prongidi-Fix; Laure Schaeffer; Angelita Simonetti; Sharief Barends; Jean-François Ménétret; Bruno P. Klaholz; Gilbert Eriani; Franck Martin

Biochem J (2013) 449 (3): 719–728.

Abstract

View Articletitled, Rapid purification of ribosomal particles assembled on histone H4 mRNA: a new method based on mRNA–DNA chimaeras

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Functional characterization of long-chain prenyl diphosphate synthases from tomato

Matthew O. Jones; Laura Perez-Fons; Francesca P. Robertson; Peter M. Bramley; Paul D. Fraser

Biochem J (2013) 449 (3): 729–740.

Abstract

View Articletitled, Functional characterization of long-chain prenyl diphosphate synthases from tomato

Supplementary data

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N-Myristoylation is essential for protein phosphatases PPM1A and PPM1B to dephosphorylate their physiological substrates in cells

Toko Chida; Masakatsu Ando; Tasuku Matsuki; Yutaro Masu; Yuko Nagaura; Teruko Takano-Yamamoto; Shinri Tamura; Takayasu Kobayashi

Biochem J (2013) 449 (3): 741–749.

Abstract

View Articletitled, N-Myristoylation is essential for protein phosphatases PPM1A and PPM1B to dephosphorylate their physiological substrates in cells

Supplementary data

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A novel transcriptional regulator, Sll1130, negatively regulates heat-responsive genes in Synechocystis sp. PCC6803

Pilla Sankara Krishna; Balaga Radha Rani; M. Karthik Mohan; Iwane Suzuki; Sisinthy Shivaji; Jogadhenu S. S. Prakash

Biochem J (2013) 449 (3): 751–760.

Abstract

View Articletitled, A novel transcriptional regulator, Sll1130, negatively regulates heat-responsive genes in Synechocystis sp. PCC6803

Supplementary data

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Nuclear factor κB down-regulates human UDP-glucuronosyltransferase 1A1: a novel mechanism involved in inflammation-associated hyperbilirubinaemia

Tzu-Yue Shiu; Tien-Yu Huang; Shih-Ming Huang; Yu-Lueng Shih; Heng-Cheng Chu; Wei-Kuo Chang; Tsai-Yuan Hsieh

Biochem J (2013) 449 (3): 761–770.

Abstract

View Articletitled, Nuclear factor κB down-regulates human UDP-glucuronosyltransferase 1A1: a novel mechanism involved in inflammation-associated hyperbilirubinaemia

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Ras-guanine-nucleotide-releasing factors 1 and 2 interact with PLCγ at focal adhesions to enable IL-1-induced Ca²⁺ signalling, ERK activation and MMP-3 expression

Qin Wang; Katherine A. Siminovitch; Gregory P. Downey; Christopher A. McCulloch

Biochem J (2013) 449 (3): 771–782.

Abstract

View Articletitled, Ras-guanine-nucleotide-releasing factors 1 and 2 interact with PLCγ at focal adhesions to enable IL-1-induced Ca2+ signalling, ERK activation and MMP-3 expression

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Redox-dependent stability of the γ-glutamylcysteine synthetase enzyme of Escherichia coli: a novel means of redox regulation

Shailesh Kumar; Neha Kasturia; Amit Sharma; Manish Datt; Anand K. Bachhawat

Biochem J (2013) 449 (3): 783–794.

Abstract

View Articletitled, Redox-dependent stability of the γ-glutamylcysteine synthetase enzyme of Escherichia coli: a novel means of redox regulation

Supplementary data

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Tetramerization of ZapA is required for FtsZ bundling

Raúl Pacheco-Gómez; Xi Cheng; Matthew R. Hicks; Corinne J. I. Smith; David I. Roper; Stephen Addinall; Alison Rodger; Timothy R. Dafforn

Biochem J (2013) 449 (3): 795–802.

Abstract

View Articletitled, Tetramerization of ZapA is required for FtsZ bundling

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Identification of a pathway by which glucose regulates β-catenin signalling via the cAMP/protein kinase A pathway in β-cell models

Emmanuelle Cognard; Coralie G. Dargaville; Deborah L. Hay; Peter R. Shepherd

Biochem J (2013) 449 (3): 803–811.

Abstract

View Articletitled, Identification of a pathway by which glucose regulates β-catenin signalling via the cAMP/protein kinase A pathway in β-cell models

Supplementary data

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Review articles

Organizing the genome with H2A histone variants

Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Research articles

nde1 deletion improves mitochondrial DNA maintenance in Saccharomyces cerevisiae coenzyme Q mutants

Regulation of adipogenesis by cytoskeleton remodelling is facilitated by acetyltransferase MEC-17-dependent acetylation of α-tubulin

The CARD plays a critical role in ASC foci formation and inflammasome signalling

ADP-ribose polymer depletion leads to nuclear Ctcf re-localization and chromatin rearrangement

Structure and function of the PorB porin from disseminating Neisseria gonorrhoeae

A novel method for purification of polymerizable tubulin with a high content of the acetylated isotype

Molecular mechanisms underlying the interaction of protein phosphatase-1c with ASPP proteins

Sphingosine 1-phosphate induces filopodia formation through S1PR2 activation of ERM proteins

Rfa2 is specifically dephosphorylated by Pph3 in Candida albicans

Structural and functional characterization of the Staphylococcus aureus virulence factor and vaccine candidate FhuD2

The dynamic action of SecA during the initiation of protein translocation

DNA-binding regulates site-specific ubiquitination of IRF-1

Rapid purification of ribosomal particles assembled on histone H4 mRNA: a new method based on mRNA–DNA chimaeras

Functional characterization of long-chain prenyl diphosphate synthases from tomato

N-Myristoylation is essential for protein phosphatases PPM1A and PPM1B to dephosphorylate their physiological substrates in cells

A novel transcriptional regulator, Sll1130, negatively regulates heat-responsive genes in Synechocystis sp. PCC6803

Nuclear factor κB down-regulates human UDP-glucuronosyltransferase 1A1: a novel mechanism involved in inflammation-associated hyperbilirubinaemia

Ras-guanine-nucleotide-releasing factors 1 and 2 interact with PLCγ at focal adhesions to enable IL-1-induced Ca²⁺ signalling, ERK activation and MMP-3 expression

Redox-dependent stability of the γ-glutamylcysteine synthetase enzyme of Escherichia coli: a novel means of redox regulation

Tetramerization of ZapA is required for FtsZ bundling

Identification of a pathway by which glucose regulates β-catenin signalling via the cAMP/protein kinase A pathway in β-cell models

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