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Soo-Un Kim
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Articles
Zhehao Jin, Juraithip Wungsintaweekul, Sang-Hoon Kim, Jeong-Han Kim, Yongho Shin, Dae-Kyun Ro, Soo-Un Kim
Biochem J (2019) BCJ20190527.
Published: 25 November 2019
Abstract
Black pepper, dried green fruit of Piper nigrum L., is a household spice most popular in the world. Piperine, the pungency compound of black pepper, is proposed to partially arise from phenylpropanoid pathway. In the biosynthesis of piperine, 4-coumarate:CoA ligase (4CLs) must play a pivotal role in activating intermediate acids to corresponding CoA thioesters to serve as substrates. Based on transcriptome data, we isolated three P. nigrum 4CL isoforms ( Pn4CL1 , -2 , and - 3 ) from unripe peppercorn. These Pn4CL s were expressed in E. coli for in - vitro enzyme assay with putative substrates, namely cinnamic, coumaric, ferulic, piperonylic, 3,4-methylenedioxycinnamic (3,4-MDCA), and piperic acids. Phylogenetic analysis and substrate usage study indicated that Pn4CL1, active towards coumaric and ferulic acids, belongs to class I 4CL for lignin synthesis. Pn4CL2 was a typical cinnamate-specific coumarate:CoA ligase-like (CLL) protein. The Pn4CL3, as class II enzyme, exhibited general 4CL activity towards coumaric and ferulic acids. However, Pn4CL3 was also active towards piperonylic acid, 3,4-MDCA, and piperic acid. Pn4CL3 possessed about 2.6 times higher catalytic efficiency ( k cat /K m ) towards 3,4-MDCA and piperic acid than towards coumaric and ferulic acids, suggesting its specific role in piperine biosynthesis. Different substrate preference among the Pn4CL isoforms can be explained by 3-dimensional protein structure modeling, which demonstrated natural variants in amino acid residues of binding pocket to accommodate different substrates. Quantitative PCR analysis of these isoforms indicated that Pn4CL1 transcript level was highest in the roots whereas Pn4CL2 in the fruits and Pn4CL3 in the leaves.
Articles
Biochem J (2014) 463 (2): 239-248.
Published: 22 September 2014
Abstract
(−)-α-Bisabolol, a sesquiterpene alcohol, is a major ingredient in the essential oil of chamomile ( Matricaria recutita ) and is used in many health products. The current supply of (−)-α-bisabolol is mainly dependent on the Brazilian candeia tree ( Eremanthus erythropappus ) by distillation or by chemical synthesis. However, the distillation method using the candeia tree is not sustainable, and chemical synthesis suffers from impurities arising from undesirable α-bisabolol isomers. Therefore enzymatic synthesis of (−)-α-bisabolol is a viable alternative. In the present study, a cDNA encoding (−)-α-bisabolol synthase ( MrBBS ) was identified from chamomile and used for enantioselective (−)-α-bisabolol synthesis in yeast. Chamomile MrBBS was identified by Illumina and 454 sequencing, followed by activity screening in yeast. When MrBBS was expressed in yeast, 8 mg of α-bisabolol was synthesized de novo per litre of culture. The structure of purified α-bisabolol was elucidated as ( S , S )-α-bisabolol [or (−)-α-bisabolol]. Although MrBBS possesses a putative chloroplast-targeting peptide, it was localized in the cytosol, and a deletion of its N-terminal 23 amino acids significantly reduced its stability and activity. Recombinant MrBBS showed kinetic properties comparable with those of other sesquiterpene synthases. These data provide compelling evidence that chamomile MrBBS synthesizes enantiopure (−)-α-bisabolol as a single sesquiterpene product, opening a biotechnological opportunity to produce (−)-α-bisabolol.
Includes: Supplementary data