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Articles

Telomerase RNA evolution: a journey from plant telomeres to broader eukaryotic diversity

Petr Fajkus, Jiří Fajkus
Journal: Biochemical Journal
Biochem J (2025) 482 (03): 167–177.
https://doi.org/10.1042/BCJ20240501
Published: 31 January 2025
View article titled, Telomerase RNA evolution: a journey from plant telomeres to broader eukaryotic diversity
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Articles

The continued evolution of the L2 cephalosporinase in Stenotrophomonas maltophilia : a key driver of beta-lactam resistance

Sylvia A. Sapula, Yu Wang, Bradley J. Hart, Jonathan J. Whittall, Henrietta Venter
Journal: Biochemical Journal
Biochem J (2025) 482 (03): 119–133.
https://doi.org/10.1042/BCJ20240478
Published: 30 January 2025
View article titled, The continued evolution of the L2 cephalosporinase in Stenotrophomonas maltophilia : a key driver of beta-lactam resistance
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Includes: Supplementary data
Articles

Evolution and maintenance of mtDNA gene content across eukaryotes

Shibani Veeraragavan, Maria Johansen, Iain G. Johnston
Journal: Biochemical Journal
Biochem J (2024) 481 (15): 1015–1042.
https://doi.org/10.1042/BCJ20230415
Published: 05 August 2024
View article titled, Evolution and maintenance of mtDNA gene content across eukaryotes
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Includes: Supplementary data
Articles

Functional annotation of haloacid dehalogenase superfamily structural genomics proteins

Lakindu S. Pathira Kankanamge, Lydia A. Ruffner, Mong Mary Touch, Manuel Pina, Penny J. Beuning, Mary Jo Ondrechen
Journal: Biochemical Journal
Biochem J (2023) 480 (19): 1553–1569.
https://doi.org/10.1042/BCJ20230057
Published: 06 October 2023
View article titled, Functional annotation of haloacid dehalogenase superfamily structural genomics proteins
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Includes: Supplementary data
Articles

Kae1 of Saccharomyces cerevisiae KEOPS complex possesses ADP/GDP nucleotidase activity

Qian-Xi Li, Jia-Cheng Liu, Ming-Hong He, Jin-Qiu Zhou
Journal: Biochemical Journal
Biochem J (2022) 479 (23): 2433–2447.
https://doi.org/10.1042/BCJ20220290
Published: 09 December 2022
View article titled, Kae1 of Saccharomyces cerevisiae KEOPS complex possesses ADP/GDP nucleotidase activity
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Articles

Gain of function of a metalloproteinase associated with multiple myeloma, bicuspid aortic valve, and Von Hippel–Lindau syndrome

Scott J. Snipas, Roberto Jappelli, Ali Torkamani, Giovanni Paternostro, Guy S. Salvesen
Journal: Biochemical Journal
Biochem J (2022) 479 (14): 1533–1542.
https://doi.org/10.1042/BCJ20220166
Published: 21 July 2022
View article titled, Gain of function of a metalloproteinase associated with multiple myeloma, bicuspid aortic valve, and Von Hippel–Lindau syndrome
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Includes: Supplementary data
Articles

Systems approaches to understand oxygen sensing: how multi-omics has driven advances in understanding oxygen-based signalling

In Collection
Towards systems biochemistry
Michael Batie, Niall S. Kenneth, Sonia Rocha
Journal: Biochemical Journal
Biochem J (2022) 479 (3): 245–257.
https://doi.org/10.1042/BCJ20210554
Published: 04 February 2022
View article titled, Systems approaches to understand oxygen sensing: how multi-omics has driven advances in understanding oxygen-based signalling
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Articles

Blackout in the powerhouse: clinical phenotypes associated with defects in the assembly of OXPHOS complexes and the mitoribosome

Daniella H. Hock, David R. L. Robinson, David A. Stroud
Journal: Biochemical Journal
Biochem J (2020) 477 (21): 4085–4132.
https://doi.org/10.1042/BCJ20190767
Published: 05 November 2020
View article titled, Blackout in the powerhouse: clinical phenotypes associated with defects in the assembly of OXPHOS complexes and the mitoribosome
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Articles

Genome-wide identification of estrogen receptor binding sites reveals novel estrogen-responsive pathways in adult male germ cells

Sanketa Raut, Anita V. Kumar, Kushaan Khambata, Sharvari Deshpande, Nafisa H. Balasinor
Journal: Biochemical Journal
Biochem J (2020) 477 (12): 2115–2131.
https://doi.org/10.1042/BCJ20190946
Published: 22 June 2020
View article titled, Genome-wide identification of estrogen receptor binding sites reveals novel estrogen-responsive pathways in adult male germ cells
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Includes: Supplementary data
Articles

Bioinformatic and experimental evidence for suicidal and catalytic plant THI4s

Jaya Joshi, Guillaume A.W. Beaudoin, Jenelle A. Patterson, Jorge D. García-García, Catherine E. Belisle, Lan-Yen Chang, Lei Li, Owen Duncan, A. Harvey Millar, Andrew D. Hanson
Journal: Biochemical Journal
Biochem J (2020) 477 (11): 2055–2069.
https://doi.org/10.1042/BCJ20200297
Published: 10 June 2020
View article titled, Bioinformatic and experimental evidence for suicidal and catalytic plant THI4s
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Includes: Supplementary data
Articles

Insights into the unique carboxylation reactions in the metabolism of propylene and acetone

Florence Mus, Hsin-Hua Wu, Alexander B. Alleman, Krista A. Shisler, Oleg A. Zadvornyy, Brian Bothner, Jennifer L. Dubois, John W. Peters
Journal: Biochemical Journal
Biochem J (2020) 477 (11): 2027–2038.
https://doi.org/10.1042/BCJ20200174
Published: 04 June 2020
View article titled, Insights into the unique carboxylation reactions in the metabolism of propylene and acetone
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Articles

Genome-wide identification and biochemical characterization of calcineurin B-like calcium sensor proteins in Chlamydomonas reinhardtii

Manoj Kumar, Komal Sharma, Akhilesh K. Yadav, Kajal Kanchan, Madhu Baghel, Suneel Kateriya, Girdhar K. Pandey
Journal: Biochemical Journal
Biochem J (2020) 477 (10): 1879–1892.
https://doi.org/10.1042/BCJ20190960
Published: 28 May 2020
View article titled, Genome-wide identification and biochemical characterization of calcineurin B-like calcium sensor proteins in Chlamydomonas reinhardtii
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Includes: Supplementary data
Articles

Cell Atlas technologies and insights into tissue architecture

In Collection
Awards
Anna Wilbrey-Clark, Kenny Roberts, Sarah A. Teichmann
Journal: Biochemical Journal
Biochem J (2020) 477 (8): 1427–1442.
https://doi.org/10.1042/BCJ20190341
Published: 27 April 2020
View article titled, Cell Atlas technologies and insights into tissue architecture
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Articles

CRISPR base editors: genome editing without double-stranded breaks

In Collection
Editors' pick of review article highlights published in the Biochemical Journal in 2018 & 2019
Ayman Eid, Sahar Alshareef, Magdy M. Mahfouz
Journal: Biochemical Journal
Biochem J (2018) 475 (11): 1955–1964.
https://doi.org/10.1042/BCJ20170793
Published: 11 June 2018
View article titled, CRISPR base editors: genome editing without double-stranded breaks
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Articles

The new normal of structure/function studies in the era of CRISPR/Cas9

Glennis A. Logsdon, Ben E. Black
Journal: Biochemical Journal
Biochem J (2018) 475 (9): 1635–1642.
https://doi.org/10.1042/BCJ20170025
Published: 15 May 2018
View article titled, The new normal of structure/function studies in the era of CRISPR/Cas9
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Articles

Omics of bifidobacteria: research and insights into their health-promoting activities

Francesca Bottacini, Douwe van Sinderen, Marco Ventura
Journal: Biochemical Journal
Biochem J (2017) 474 (24): 4137–4152.
https://doi.org/10.1042/BCJ20160756
Published: 06 December 2017
View article titled, Omics of bifidobacteria: research and insights into their health-promoting activities
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Articles

Escherichia coli and Neisseria gonorrhoeae UvrD helicase unwinds G4 DNA structures

Kaustubh Shukla, Roshan Singh Thakur, Debayan Ganguli, Desirazu Narasimha Rao, Ganesh Nagaraju
Journal: Biochemical Journal
Biochem J (2017) 474 (21): 3579–3597.
https://doi.org/10.1042/BCJ20170587
Published: 18 October 2017
View article titled, Escherichia coli and Neisseria gonorrhoeae UvrD helicase unwinds G4 DNA structures
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Includes: Supplementary data
Articles

Dopamine D1A directly interacts with otoferlin synaptic pathway proteins: Ca 2+ and phosphorylation underlie an NSF-to-AP2mu1 molecular switch

Dakshnamurthy Selvakumar, Marian J. Drescher, Nathan A. Deckard, Neeliyath A. Ramakrishnan, Barbara J. Morley, Dennis G. Drescher
Journal: Biochemical Journal
Biochem J (2017) 474 (1): 79–104.
https://doi.org/10.1042/BCJ20160690
Published: 22 December 2016
View article titled, Dopamine D1A directly interacts with otoferlin synaptic pathway proteins: Ca 2+ and phosphorylation underlie an NSF-to-AP2mu1 molecular switch
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Includes: Supplementary data
Articles

Reappraisal of putative glyoxalase 1-deficient mouse and dicarbonyl stress on embryonic stem cells in vitro

Alaa Shafie, Mingzhan Xue, Guy Barker, Daniel Zehnder, Paul J. Thornalley, Naila Rabbani
Journal: Biochemical Journal
Biochem J (2016) 473 (22): 4255–4270.
https://doi.org/10.1042/BCJ20160691
Published: 10 November 2016
View article titled, Reappraisal of putative glyoxalase 1-deficient mouse and dicarbonyl stress on embryonic stem cells in vitro
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Includes: Supplementary data
Articles

The mutational signature of chronic lymphocytic leukemia

Helen Parker, Jonathan C. Strefford
Journal: Biochemical Journal
Biochem J (2016) 473 (21): 3725–3740.
https://doi.org/10.1042/BCJ20160256
Published: 27 October 2016
View article titled, The mutational signature of chronic lymphocytic leukemia
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Articles

The bacterial enhancer-dependent RNA polymerase

Nan Zhang, Vidya C. Darbari, Robert Glyde, Xiaodong Zhang, Martin Buck
Journal: Biochemical Journal
Biochem J (2016) 473 (21): 3741–3753.
https://doi.org/10.1042/BCJ20160741C
Published: 27 October 2016
View article titled, The bacterial enhancer-dependent RNA polymerase
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Articles

Nectin spot: a novel type of nectin-mediated cell adhesion apparatus

Kiyohito Mizutani, Yoshimi Takai
Journal: Biochemical Journal
Biochem J (2016) 473 (18): 2691–2715.
https://doi.org/10.1042/BCJ20160235
Published: 12 September 2016
View article titled, Nectin spot: a novel type of nectin-mediated cell adhesion apparatus
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