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Keywords: Caenorhabditis elegans
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Articles
Identification of a dTDP-rhamnose biosynthetic pathway that oscillates with the molting cycle in Caenorhabditis elegans
Available to Purchase
Journal:
Biochemical Journal
Biochem J (2016) 473 (11): 1507–1521.
Published: 27 May 2016
... in Caenorhabditis elegans that is highly conserved across nematode species. We show that RML-1 activates glucose 1-phosphate (Glc-1-P) in the presence of either dTTP or UTP to yield dTDP-glucose or UDP-glucose, respectively. RML-2 is a dTDP-glucose 4,6-dehydratase, converting dTDP-glucose into dTDP-4-keto-6...
Includes: Supplementary data
Articles
HSF-1 is involved in regulation of ascaroside pheromone biosynthesis by heat stress in Caenorhabditis elegans
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Journal:
Biochemical Journal
Biochem J (2016) 473 (6): 789–796.
Published: 10 March 2016
...Hyoe-Jin Joo; Saeram Park; Kwang-Youl Kim; Mun-Young Kim; Heekyeong Kim; Donha Park; Young-Ki Paik The nematode worm Caenorhabditis elegans survives by adapting to environmental stresses such as temperature extremes by increasing the concentrations of ascaroside pheromones, termed ascarosides...
Includes: Supplementary data
Articles
Loss of DNase II function in the gonad is associated with a higher expression of antimicrobial genes in Caenorhabditis elegans
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Journal:
Biochemical Journal
Biochem J (2015) 470 (1): 145–154.
Published: 06 August 2015
...Hsiang Yu; Huey-Jen Lai; Tai-Wei Lin; Chang-Shi Chen; Szecheng J. Lo Three waves of apoptosis shape the development of Caenorhabditis elegans . Although the exact roles of the three DNase II genes ( nuc-1 , crn-6 and crn-7 ), which are known to mediate degradation of apoptotic DNA, in the embryonic...
Includes: Multimedia, Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2015) 466 (1): 37–44.
Published: 06 February 2015
... and remains one of the most important anthelmintic drugs for medical and veterinary use. We have characterized how Caenorhabditis elegans metabolizes and excretes TBZ. We have shown that TBZ directly binds to the nuclear hormone receptor (NHR)-176 and that this receptor is required for the induction by TBZ...
Includes: Supplementary data
Articles
Trace analysis of methylated and hydroxymethylated cytosines in DNA by isotope-dilution LC–MS/MS: first evidence of DNA methylation in Caenorhabditis elegans
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Journal:
Biochemical Journal
Biochem J (2015) 465 (1): 39–47.
Published: 12 December 2014
...Chiung-Wen Hu; Jian-Lian Chen; Yu-Wen Hsu; Cheng-Chieh Yen; Mu-Rong Chao From 1986 to the present, the popular research model organism Caenorhabditis elegans has been thought to completely lack DNA methylation and seems to have lost DNA methylation enzymes from its genomes. In the present study, we...
Includes: Supplementary data
Articles
Synthetic DAF-12 modulators with potential use in controlling the nematode life cycle
Available to PurchaseMaría V. Dansey, Lautaro D. Alvarez, Gisela Samaja, Daiana S. Escudero, Adriana S. Veleiro, Adalí Pecci, Olga A. Castro, Gerardo Burton
Journal:
Biochemical Journal
Biochem J (2015) 465 (1): 175–184.
Published: 12 December 2014
... in a transactivation cell-based luciferase assay and rescued the Mig phenotype of daf-9 ( rh50 ) Caenorhabditis elegans mutants. In the present paper, to investigate further the relationship between the structure of the steroid side chain and DAF-12 activity, we evaluated the in vitro and in vivo activity of Δ 4 -DA...
Includes: Supplementary data
Articles
CYP-13A12 of the nematode Caenorhabditis elegans is a PUFA-epoxygenase involved in behavioural response to reoxygenation
Available to PurchaseJulia Keller, Alexandra Ellieva, Dengke K. Ma, Jingjuan Ju, Erik Nehk, Anne Konkel, John R. Falck, Wolf-Hagen Schunck, Ralph Menzel
Journal:
Biochemical Journal
Biochem J (2014) 464 (1): 61–71.
Published: 23 October 2014
...Julia Keller; Alexandra Ellieva; Dengke K. Ma; Jingjuan Ju; Erik Nehk; Anne Konkel; John R. Falck; Wolf-Hagen Schunck; Ralph Menzel A specific behavioural response of Caenorhabditis elegans , the rapid increase of locomotion in response to anoxia/reoxygenation called the O2-ON response, has been...
Articles
PKG and NHR-49 signalling co-ordinately regulate short-term fasting-induced lysosomal lipid accumulation in C. elegans
Available to PurchaseWen-ming Huang, Zhao-yu Li, Yan-jun Xu, Wei Wang, Mao-ge Zhou, Peng Zhang, Ping-sheng Liu, Tao Xu, Zheng-xing Wu
Journal:
Biochemical Journal
Biochem J (2014) 461 (3): 509–520.
Published: 10 July 2014
...Wen-ming Huang; Zhao-yu Li; Yan-jun Xu; Wei Wang; Mao-ge Zhou; Peng Zhang; Ping-sheng Liu; Tao Xu; Zheng-xing Wu Lysosomes act as terminal degradation organelles to hydrolyse macromolecules derived from both the extracellular space and the cytoplasm. In Caenorhabditis elegans fasting induces...
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2013) 456 (2): 219–229.
Published: 08 November 2013
...Ying Feng; Barnabas G. Williams; Françoise Koumanov; Adrian J. Wolstenholme; Geoffrey D. Holman Caenorhabditis elegans is widely used as a model for investigation of the relationships between aging, nutrient restriction and signalling via the DAF-2 (abnormal dauer formation 2) receptor for insulin...
Includes: Supplementary data
Articles
Aggrephagy: lessons from C. elegans
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Journal:
Biochemical Journal
Biochem J (2013) 452 (3): 381–390.
Published: 31 May 2013
... between yeast and higher eukaryotes. Very little is known about essential autophagy components specific to higher eukaryotes. Recent studies have shown that a variety of protein aggregates are selectively removed by autophagy (a process termed aggrephagy) during Caenorhabditis elegans embryogenesis...
Articles
Co-operative function and mutual stabilization of the half ATP-binding cassette transporters HAF-4 and HAF-9 in Caenorhabditis elegans
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Journal:
Biochemical Journal
Biochem J (2013) 452 (3): 467–475.
Published: 31 May 2013
...Takahiro Tanji; Kenji Nishikori; Hirohisa Shiraishi; Masatomo Maeda; Ayako Ohashi-Kobayashi Caenorhabditis elegans HAF-4 and HAF-9 are half ABC (ATP-binding-cassette) transporters that are highly homologous to the human lysosomal peptide transporter TAPL [TAP (transporter associated with antigen...
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2012) 443 (2): 535–547.
Published: 27 March 2012
... describe a novel structural arrangement of the CBS enzyme encoded by the cbs-1 gene of the nematode Caenorhabditis elegans . The CBS-1 protein contains a unique tandem repeat of two evolutionarily conserved catalytic regions in a single polypeptide chain. These repeats include a catalytically active C...
Includes: Supplementary data
Articles
Tissue- and paralogue-specific functions of acyl-CoA-binding proteins in lipid metabolism in Caenorhabditis elegans
Available to PurchaseIda C. Elle, Karina T. Simonsen, Louise C. B. Olsen, Pernille K. Birck, Sidse Ehmsen, Simon Tuck, Thuc T. Le, Nils J. Færgeman
Journal:
Biochemical Journal
Biochem J (2011) 437 (2): 231–241.
Published: 28 June 2011
... eukaryotic species, indicating that it performs a basal cellular function. However, differential tissue expression and the existence of several ACBP paralogues in many eukaryotic species indicate that these proteins serve distinct functions. The nematode Caenorhabditis elegans expresses seven ACBPs: four...
Includes: Supplementary data
Articles
Eicosanoid formation by a cytochrome P450 isoform expressed in the pharynx of Caenorhabditis elegans
Available to PurchaseMandy Kosel, Waltraud Wild, Alexandra Bell, Michael Rothe, Carsten Lindschau, Christian E. W. Steinberg, Wolf-Hagen Schunck, Ralph Menzel
Journal:
Biochemical Journal
Biochem J (2011) 435 (3): 689–700.
Published: 13 April 2011
...Mandy Kosel; Waltraud Wild; Alexandra Bell; Michael Rothe; Carsten Lindschau; Christian E. W. Steinberg; Wolf-Hagen Schunck; Ralph Menzel Caenorhabditis elegans harbours several CYP (cytochrome P450) genes that are homologous with mammalian CYP isoforms important to the production...
Includes: Supplementary data
Articles
HID-1 is a novel player in the regulation of neuropeptide sorting
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Journal:
Biochemical Journal
Biochem J (2011) 434 (3): 383–390.
Published: 24 February 2011
... that novel players remain to be identified. A search for mutants in Caenorhabditis elegans with a Hid ( h igh-temperature- i nduced d auer formation) phenotype, identified mutations in the hid-1 gene [ 6 ]. The hid-1 gene encodes a highly conserved putative protein (HID-1) with homologues...
Includes: Multimedia, Supplementary data
Articles
Divergence in enzyme regulation between Caenorhabditis elegans and human tyrosine hydroxylase, the key enzyme in the synthesis of dopamine
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Journal:
Biochemical Journal
Biochem J (2011) 434 (1): 133–141.
Published: 27 January 2011
...Ana C. Calvo; Angel L. Pey; Antonio Miranda-Vizuete; Anne P. Døskeland; Aurora Martinez TH (tyrosine hydroxylase) is the rate-limiting enzyme in the synthesis of catecholamines. The cat-2 gene of the nematode Caenorhabditis elegans is expressed in mechanosensory dopaminergic neurons and has been...
Includes: Supplementary data
Articles
Caenorhabditis elegans utilizes dauer pheromone biosynthesis to dispose of toxic peroxisomal fatty acids for cellular homoeostasis
Available to PurchaseHyoe-Jin Joo, Yong-Hyeon Yim, Pan-Young Jeong, You-Xun Jin, Jeong-Eui Lee, Heekyeong Kim, Seul-Ki Jeong, David J. Chitwood, Young-Ki Paik
Journal:
Biochemical Journal
Biochem J (2009) 422 (1): 61–71.
Published: 29 July 2009
...Hyoe-Jin Joo; Yong-Hyeon Yim; Pan-Young Jeong; You-Xun Jin; Jeong-Eui Lee; Heekyeong Kim; Seul-Ki Jeong; David J. Chitwood; Young-Ki Paik Caenorhabditis elegans excretes a dauer pheromone or daumone composed of ascarylose and a fatty acid side chain, the perception of which enables worms to enter...
Includes: Supplementary data
Articles
Phosphoethanolamine N -methyltransferase (PMT-1) catalyses the first reaction of a new pathway for phosphocholine biosynthesis in Caenorhabditis elegans
Available to PurchaseKatherine M. Brendza, William Haakenson, Rebecca E. Cahoon, Leslie M. Hicks, Lavanya H. Palavalli, Brandi J. Chiapelli, Merry McLaird, James P. McCarter, D. Jeremy Williams, Michelle C. Hresko, Joseph M. Jez
Journal:
Biochemical Journal
Biochem J (2007) 404 (3): 439–448.
Published: 29 May 2007
... the identification of biochemical targets not found in host organisms. Recent studies suggest that Caenorhabditis elegans synthesizes phosphocholine through the action of PEAMT ( S -adenosyl- L -methionine:phosphoethanolamine N -methyltransferases) that convert phosphoethanolamine into phosphocholine. Here, we...
Articles
A protein extension to shorten RNA: elongated elongation factor-Tu recognizes the D-arm of T-armless tRNAs in nematode mitochondria
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Journal:
Biochemical Journal
Biochem J (2006) 399 (2): 249–256.
Published: 27 September 2006
... mitochondrial translation system employs two different EF-Tu factors named EF-Tu1 and EF-Tu2. Our previous study showed that nematode Caenorhabditis elegans EF-Tu1 binds specifically to T-armless tRNA. C. elegans EF-Tu1 has a 57-amino acid C-terminal extension that is absent from canonical EF-Tu, and the T-arm...
Includes: Supplementary data
Articles
Cecropin P1 and novel nematode cecropins: a bacteria-inducible antimicrobial peptide family in the nematode Ascaris suum
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Journal:
Biochemical Journal
Biochem J (2005) 390 (1): 207–214.
Published: 09 August 2005
... the bigger insects [ 4 ]. Many important genes, such as toll and imd , have been identified using D. melanogaster [ 4 ]. Caenorhabditis elegans cecropin innate immunity molecular evolution nematode 5′ rapid amplification of cDNA ends (RACE) To screen novel Ascaris transcripts...
Articles
Caenorhabditis elegans triple null mutant lacking UDP-N-acetyl-D-glucosamine:α-3-D-mannoside β1,2-N-acetylglucosaminyltransferase I
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Journal:
Biochemical Journal
Biochem J (2004) 382 (3): 995–1001.
Published: 07 September 2004
... development under laboratory conditions. The TKO worm may be more susceptible to mutations in other genes, thereby providing an approach for the identification of genes that interact with GnT I. Caenorhabditis elegans N -acetylglucosaminyltransferase I null mutations mass spectrometry (MS) N...
Articles
Relevance of NAC-2, an Na+-coupled citrate transporter, to life span, body size and fat content in Caenorhabditis elegans
Available to PurchaseYou-Jun FEI, Jin-Cai LIU, Katsuhisa INOUE, Lina ZHUANG, Katsuya MIYAKE, Seiji MIYAUCHI, Vadivel GANAPATHY
Journal:
Biochemical Journal
Biochem J (2004) 379 (1): 191–198.
Published: 01 April 2004
...You-Jun FEI; Jin-Cai LIU; Katsuhisa INOUE; Lina ZHUANG; Katsuya MIYAKE; Seiji MIYAUCHI; Vadivel GANAPATHY We have cloned and functionally characterized an Na + -coupled citrate transporter from Caenorhabditis elegans (ceNAC-2). This transporter shows significant sequence homology to Drosophila Indy...
Articles
Latrophilin is required for toxicity of black widow spider venom in Caenorhabditis elegans
Available to PurchaseChristopher J. MEE, Simon R. TOMLINSON, Pavel V. PERESTENKO, David de POMERAI, Ian R. DUCE, Peter N. R. USHERWOOD, David R. BELL
Journal:
Biochemical Journal
Biochem J (2004) 378 (1): 185–191.
Published: 15 February 2004
...Christopher J. MEE; Simon R. TOMLINSON; Pavel V. PERESTENKO; David de POMERAI; Ian R. DUCE; Peter N. R. USHERWOOD; David R. BELL Black widow spider venom (BWSV) kills Caenorhabditis elegans after injection owing to the presence of heat- and detergent-sensitive components, which are high-molecular...
Articles
Wenli ZHANG, Pinjiang CAO, Shihao CHEN, Andrew M. SPENCE, Shaoxian ZHU, Erika STAUDACHER, Harry SCHACHTER
Journal:
Biochemical Journal
Biochem J (2003) 372 (1): 53–64.
Published: 15 May 2003
...Wenli ZHANG; Pinjiang CAO; Shihao CHEN; Andrew M. SPENCE; Shaoxian ZHU; Erika STAUDACHER; Harry SCHACHTER We have previously reported three Caenorhabditis elegans genes ( gly-12, gly-13 and gly-14 ) encoding UDP- N -acetyl- d -glucosamine:α-3- d -mannoside β1,2- N -acetylglucosaminyltransferase I...
Articles
Nematode pyruvate dehydrogenase kinases: role of the C-terminus in binding to the dihydrolipoyl transacetylase core of the pyruvate dehydrogenase complex
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Journal:
Biochemical Journal
Biochem J (1999) 339 (1): 103–109.
Published: 25 March 1999
...Wei CHEN; Patricia R. KOMUNIECKI; Richard KOMUNIECKI Pyruvate dehydrogenase kinases (PDKs) from the anaerobic parasitic nematode Ascaris suum and the free-living nematode Caenorhabditis elegans were functionally expressed with hexahistidine tags at their N-termini and purified to apparent...