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1-7 of 7
Keywords: biophysics
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Articles
Revamped role for approved drug: integrative computational and biophysical analysis of saquinavir's peptidyl arginine deiminase 4 inhibition for rheumatoid arthritis
Available to PurchaseIndhumathi Thirugnanasambandham, Srikanth Jupudi, Parikshit Roychowdhury, Veera Venkata Satyanarayana Reddy Karri, Subba Rao V. Madhunapantula, Sachin Kumar Singh, Vetriselvan Subramaniyan, Gowthamarajan Kuppusamy
Journal:
Biochemical Journal
Biochem J (2024) 481 (20): 1379–1393.
Published: 07 October 2024
... compounds exhibiting high binding affinities. Among these compounds, Saquinavir (SQV) emerged as a potent PAD4 inhibitor, demonstrating competitive inhibition with a low IC 50 value of 1.21 ± 0.04 µM. In vitro assays, including enzyme kinetics and biophysical analyses, highlighted significant changes...
Includes: Supplementary data
Articles
Binding properties of the quaternary assembly protein SPAG1
Available to PurchaseMarie-Eve Chagot, Raphael Dos Santos Morais, Sana Dermouche, Dorian Lefebvre, Xavier Manival, Christophe Chipot, François Dehez, Marc Quinternet
Journal:
Biochemical Journal
Biochem J (2019) 476 (11): 1679–1694.
Published: 14 June 2019
... that a SPAG1 sub-fragment, containing a putative P-loop motif, cannot efficiently bind and hydrolyze GTP in vitro . Our data challenge the interpretation of SPAG1 possessing GTPase activity. We propose instead that SPAG1 regulates nucleotide hydrolysis activity of the HSP and RUVBL1/2 partners. biophysics...
Includes: Multimedia, Supplementary data
Articles
The HIV gp41 pocket binding domain enables C-terminal heptad repeat transition from mediating membrane fusion to immune modulation
Available to Purchase
Journal:
Biochemical Journal
Biochem J (2016) 473 (7): 911–918.
Published: 29 March 2016
... role in membrane fusion. To investigate this dual function, we used two independent cell cultures coupled with biophysical techniques. The data reveal that the PBD mediates T-cell suppression by stabilizing a TCR-binding conformation in the membrane. Moreover, we show that the clinically used HIV...
Includes: Supplementary data
Articles
Mechanisms of biofilm inhibition and degradation by antimicrobial peptides
Available to Purchase
Journal:
Biochemical Journal
Biochem J (2015) 468 (2): 259–270.
Published: 22 May 2015
... by the properties of the AMPs using a series of peptides composed of six lysines and nine leucines, which differ in their sequences and hence their biophysical properties. Treatment with bactericidal peptides at non-inhibitory concentrations resulted in reduced biofilm growth, for some starting from 25 nM which...
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2014) 461 (2): 213–222.
Published: 26 June 2014
... aid in deciphering the function of DHSM in biological membranes. biophysics HIV HIV entry inhibitor membrane fusion membrane protein protein folding HIV-1 entry into the cells is blocked by alteration in the levels of Chol (cholesterol) and sphingolipids that are essential...
Includes: Supplementary data
Articles
Relationship between protein structural fluctuations and rebinding dynamics in ferric haem nitrosyls
Available to Purchase
Journal:
Biochemical Journal
Biochem J (2011) 433 (3): 459–468.
Published: 14 January 2011
... the diagonal of the 2D-IR spectrum. If c 2D is zero, the line will be uncorrelated and circular in shape. Finally, a c 2D value of −1 indicates an anticorrelated lineshape, which will be elongated along the antidiagonal of the spectrum. biophysics haem protein two-dimensional infrared (2D-IR...
Articles
Ljiljana Sjekloća, Petr V. Konarev, John Eccleston, Ian A. Taylor, Dmitri I. Svergun, Annalisa Pastore
Journal:
Biochemical Journal
Biochem J (2009) 419 (2): 347–357.
Published: 27 March 2009
... studied their behaviour in solution by complementary biochemical and biophysical techniques, identified the regions which promote self-association and determined their overall three-dimensional shape. The present study paves the way to further studies and rationalizes the existing knowledge on the self...
Includes: Supplementary data