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1-13 of 13
Keywords: carbohydrate-binding module
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Articles
Biophysical characterization of laforin–carbohydrate interaction
Available to PurchaseDavid M. Dias, Joana Furtado, Emeric Wasielewski, Rui Cruz, Bernard Costello, Lindsay Cole, Tiago Q. Faria, Philipp Baaske, Rui M. M. Brito, Alessio Ciulli, Isaura Simões, Sandra Macedo-Ribeiro, Carlos Faro, Carlos F. G. C. Geraldes, Pedro Castanheira
Journal:
Biochemical Journal
Biochem J (2016) 473 (3): 335–345.
Published: 25 January 2016
... phosphatase (DSP) involved in glycogen metabolism regulation containing a carbohydrate-binding module (CBM). Mutations in the gene coding for laforin are responsible for the development of Lafora disease, a progressive fatal myoclonus epilepsy with early onset, characterized by the intracellular deposition...
Includes: Supplementary data
Articles
Dissecting structure–function–stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168
Available to PurchaseCamila R. Santos, Joice H. Paiva, Maurício L. Sforça, Jorge L. Neves, Rodrigo Z. Navarro, Júnio Cota, Patrícia K. Akao, Zaira B. Hoffmam, Andréia N. Meza, Juliana H. Smetana, Maria L. Nogueira, Igor Polikarpov, José Xavier-Neto, Fábio M. Squina, Richard J. Ward, Roberto Ruller, Ana C. Zeri, Mário T. Murakami
Journal:
Biochemical Journal
Biochem J (2012) 441 (1): 95–104.
Published: 14 December 2011
... (glycoside hydrolase 5) catalytic domain fused to a CBM3 (family 3 carbohydrate-binding module). NMR structural analysis revealed that the Bacillus CBM3 represents a new subfamily, which lacks the classical calcium-binding motif, and variations in NMR frequencies in the presence of cellopentaose showed...
Includes: Supplementary data
Articles
Crystal structures of the starch-binding domain from Rhizopus oryzae glucoamylase reveal a polysaccharide-binding path
Available to PurchaseJung-Yu Tung, Margaret Dah-Tsyr Chang, Wei-I Chou, Yen-Yi Liu, Yi-Hung Yeh, Fan-Yu Chang, Shu-Chuan Lin, Zhen-Liang Qiu, Yuh-Ju Sun
Journal:
Biochemical Journal
Biochem J (2008) 416 (1): 27–36.
Published: 28 October 2008
.../ ) classification, which is based on primary sequence similarity, groups the SBD of Ro GA into CBMs (carbohydrate-binding modules) family 21 ( Ro GACBM21) [ 11 , 12 ]. To date, 51 CBM families have been classified, and eight of them (families 20, 21, 25, 26, 34, 41, 45 and 48) have starch-binding activity [ 13...
Articles
Novel xylan-binding properties of an engineered family 4 carbohydrate-binding module
Available to PurchaseLavinia Cicortas Gunnarsson, Cedric Montanier, Richard B. Tunnicliffe, Mike P. Williamson, Harry J. Gilbert, Eva Nordberg Karlsson, Mats Ohlin
Journal:
Biochemical Journal
Biochem J (2007) 406 (2): 209–214.
Published: 13 August 2007
... to introduce novel specificities into CBMs (carbohydrate-binding modules) has not been extensively explored. Here, we report the engineering of a CBM, CBM4-2 from the Rhodothermus marinus xylanase Xyn10A, and the identification of the X-2 variant. As compared with the wild-type protein, this engineered module...
Articles
The family 42 carbohydrate-binding module of family 54 α-L-arabinofuranosidase specifically binds the arabinofuranose side chain of hemicellulose
Available to PurchaseAkimasa Miyanaga, Takuya Koseki, Yozo Miwa, Yuichiro Mese, Sachiko Nakamura, Atsushi Kuno, Jun Hirabayashi, Hiroshi Matsuzawa, Takayoshi Wakagi, Hirofumi Shoun, Shinya Fushinobu
Journal:
Biochemical Journal
Biochem J (2006) 399 (3): 503–511.
Published: 13 October 2006
... -arabinose-containing hemicelluloses such as arabinoxylan. AkAbf54 (the glycoside hydrolase family 54 α- L -arabinofuranosidase from Aspergillus kawachii ) consists of two domains, a catalytic and an arabinose-binding domain. The latter has been named AkCBM42 [family 42 CBM (carbohydrate-binding module...
Includes: Supplementary data
Articles
An olive pollen protein with allergenic activity, Ole e 10, defines a novel family of carbohydrate-binding modules and is potentially implicated in pollen germination
Available to PurchasePatricia Barral, Cinthya Suárez, Eva Batanero, Carlos Alfonso, Juan de Dios Alché, María Isabel Rodríguez-García, Mayte Villalba, Germán Rivas, Rosalía Rodríguez
Journal:
Biochemical Journal
Biochem J (2005) 390 (1): 77–84.
Published: 09 August 2005
...Patricia Barral; Cinthya Suárez; Eva Batanero; Carlos Alfonso; Juan de Dios Alché; María Isabel Rodríguez-García; Mayte Villalba; Germán Rivas; Rosalía Rodríguez CBMs (carbohydrate-binding modules) are the most common non-catalytic modules associated with enzymes active in plant cell-wall...
Articles
Molecular cloning and characterization of a novel β-1,3-xylanase possessing two putative carbohydrate-binding modules from a marine bacterium Vibrio sp. strain AX-4
Available to PurchaseMasashi KIYOHARA, Keishi SAKAGUCHI, Kuniko YAMAGUCHI, Toshiyoshi ARAKI, Takashi NAKAMURA, Makoto ITO
Journal:
Biochemical Journal
Biochem J (2005) 388 (3): 949–957.
Published: 07 June 2005
... that the β-1,3-xylanase is a modular enzyme composed of a putative catalytic module belonging to glycoside hydrolase family 26 and two putative carbohydrate-binding modules belonging to family 31. The recombinant enzyme hydrolysed β-1,3-xylan to yield xylo-oligosaccharides with different numbers of xylose...
Articles
The interaction of carbohydrate-binding modules with insoluble non-crystalline cellulose is enthalpically driven
Available to Purchase
Journal:
Biochemical Journal
Biochem J (2005) 385 (2): 479–484.
Published: 07 January 2005
...Alisdair B. BORASTON Natural cellulose exists as a composite of cellulose forms, which can be broadly characterized as crystalline or non-crystalline. The recognition of both of these forms of cellulose by the CBMs (carbohydrate-binding modules) of microbial glycoside hydrolases is important...
Articles
Kinetic and structural optimization to catalysis at low temperatures in a psychrophilic cellulase from the Antarctic bacterium Pseudoalteromonas haloplanktis
Available to Purchase
Journal:
Biochemical Journal
Biochem J (2004) 384 (2): 247–253.
Published: 23 November 2004
... coli . This cellulase is composed of three structurally and functionally distinct regions: an N-terminal catalytic domain belonging to glycosidase family 5 and a C-terminal cellulose-binding domain belonging to carbohydrate-binding module family 5. The linker of 107 residues connecting both domains...
Articles
Characterization of XYN10B, a modular xylanase from the ruminal protozoan Polyplastron multivesiculatum, with a family 22 carbohydrate-binding module that binds to cellulose
Available to PurchaseEstelle DEVILLARD, Christel BERA-MAILLET, Harry J. FLINT, Karen P. SCOTT, C. James NEWBOLD, R. John WALLACE, Jean-Pierre JOUANY, Evelyne FORANO
Journal:
Biochemical Journal
Biochem J (2003) 373 (2): 495–503.
Published: 15 July 2003
... is the first protozoan family 10 glycoside hydrolase characterized so far and is a modular enzyme comprising a family 22 carbohydrate-binding module (CBM) preceding the catalytic domain. The CBM22 was shown to be a true CBM. It showed high affinity for soluble arabinoxylan and is the first example of a CBM22...
Articles
The modular architecture of Cellvibrio japonicus mannanases in glycoside hydrolase families 5 and 26 points to differences in their role in mannan degradation
Available to PurchaseDeborah HOGG, Gavin PELL, Paul DUPREE, Florence GOUBET, Susana M. MARTÍN-ORÚE, Sylvie ARMAND, Harry J. GILBERT
Journal:
Biochemical Journal
Biochem J (2003) 371 (3): 1027–1043.
Published: 01 May 2003
..., Man5B, Man5C and Man26B, respectively. Man26B consists of an N-terminal signal peptide linked via an extended serine-rich region to a GH26 catalytic domain. Man5A, Man5B and Man5C contain GH5 catalytic domains and non-catalytic carbohydrate-binding modules (CBMs) belonging to families 2a, 5 and 10...
Articles
A new family of rhamnogalacturonan lyases contains an enzyme that binds to cellulose
Available to PurchaseVincent A. MCKIE, Jean-Paul VINCKEN, Alphons G. J. VORAGEN, Lambertus A. M. VAN DEN BROEK, Elaine STIMSON, Harry J. GILBERT
Journal:
Biochemical Journal
Biochem J (2001) 355 (1): 167–177.
Published: 26 February 2001
... of catalytic domains and distinct non-catalytic carbohydrate-binding modules (CBMs). To investigate whether the main-chain-cleaving pectinases from this bacterium also have a modular structure, a library of P. cellulosa genomic DNA, constructed in λZAPII, was screened for pectinase-encoding sequences...
Articles
A novel mechanism of xylan binding by a lectin-like module from Streptomyces lividans xylanase 10A
Available to Purchase
Journal:
Biochemical Journal
Biochem J (2000) 350 (3): 933–941.
Published: 08 September 2000
...Alisdair B. BORASTON; Peter TOMME; Emily A. AMANDORON; Douglas G. KILBURN The C-terminal module of xylanase 10A from Streptomyces lividans is a family 13 carbohydrate-binding module (CBM13). CBM13 binds mono- and oligo-saccharides with association constants of ≈ 1×10 2 M -1 −1×10 3 M -1...