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1-29 of 29
Keywords: heparin
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Articles
Journal:
Biochemical Journal
Biochem J (2021) 478 (5): 1009–1021.
Published: 04 March 2021
... impact chemokine monomer/dimer levels, chemotactic and haptotactic gradients, life time, and presentation for receptor binding. Here, we show that Cxcl1 and Cxcl2 also form heterodimers. Using a disulfide-trapped Cxcl1–Cxcl2 heterodimer, we characterized its binding to free heparin using nuclear magnetic...
Includes: Supplementary data
Articles
Dominic P. Byrne, Yong Li, Krithika Ramakrishnan, Igor L. Barsukov, Edwin A. Yates, Claire E. Eyers, Dulcé Papy-Garcia, Sandrine Chantepie, Vijayakanth Pagadala, Jian Liu, Carrow Wells, David H. Drewry, William J. Zuercher, Neil G. Berry, David G. Fernig, Patrick A. Eyers
Journal:
Biochemical Journal
Biochem J (2018) 475 (15): 2417–2433.
Published: 14 August 2018
... glycan sulfation is based around small-molecule inhibitors of sulfatase-2 (Sulf-2), such as OKN-007 [ 14 ] or heparanase inhibitors and HS mimics, including roneparstat and PG545, which have been employed for basic and clinical investigation [ 15 ]. heparan sulfate heparin inhibitor kinase...
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2017) 474 (7): 1093–1107.
Published: 08 March 2017
... to interact with heparin and heparan sulfate (HS). Structural studies of DAN family members Gremlin-1 and Gremlin-2 (Grem2) have revealed a dimeric growth factor-like fold where a series of lysine residues cluster along one face of the protein. In the present study, we used mutagenesis, heparin-binding...
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2016) 473 (15): 2273–2293.
Published: 28 July 2016
.... 1 Correspondence may be addressed to either author (email [email protected] or [email protected] ). 22 1 2016 24 3 2016 31 3 2016 © 2016 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society 2016 allosteric regulation heparin...
Articles
Journal:
Biochemical Journal
Biochem J (2015) 472 (1): 121–133.
Published: 30 October 2015
... ligand. To resolve these issues, we characterized the binding of a series of heparin-derived oligosaccharides [heparin disaccharide (dp2), heparin tetrasaccharide (dp4), heparin octasaccharide (dp8) and heparin 14-mer (dp14)] to the wild-type (WT) dimer and a designed monomer using solution NMR...
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2015) 470 (1): 53–64.
Published: 06 August 2015
... development and is re-expressed during tissue fibrosis. Gremlin binds strongly to heparin and heparan sulfate and, in the present study, we sought to investigate its heparin-binding site. In order to explore a putative non-contiguous binding site predicted by computational molecular modelling, we substituted...
Articles
Nobuaki Higashi, Michihiko Waki, Mayumi Sue, Yusuke Kogane, Hiroaki Shida, Naoki Tsunekawa, Ahasanul Hasan, Takeshi Sato, Ayumi Kitahara, Tatsuhiko Kasaoka, Yoshihiro Hayakawa, Motowo Nakajima, Tatsuro Irimura
Journal:
Biochemical Journal
Biochem J (2014) 458 (2): 291–299.
Published: 14 February 2014
...Nobuaki Higashi; Michihiko Waki; Mayumi Sue; Yusuke Kogane; Hiroaki Shida; Naoki Tsunekawa; Ahasanul Hasan; Takeshi Sato; Ayumi Kitahara; Tatsuhiko Kasaoka; Yoshihiro Hayakawa; Motowo Nakajima; Tatsuro Irimura Heparanase cleaves macromolecular heparin in the secretory granules of connective tissue...
Includes: Supplementary data
Articles
Marco Guerrini, Stefano Elli, Pierre Mourier, Timothy R. Rudd, Davide Gaudesi, Benito Casu, Christian Boudier, Giangiacomo Torri, Christian Viskov
Journal:
Biochemical Journal
Biochem J (2013) 449 (2): 343–351.
Published: 14 December 2012
...Marco Guerrini; Stefano Elli; Pierre Mourier; Timothy R. Rudd; Davide Gaudesi; Benito Casu; Christian Boudier; Giangiacomo Torri; Christian Viskov The 3-O-sulfation of N-sulfated glucosamine is the last event in the biosynthesis of heparin/heparan sulfate, giving rise to the antithrombin-binding...
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2010) 429 (2): 379–389.
Published: 28 June 2010
... on the enzyme, whereas heparin binds at an additional site and has a strongly stabilizing effect that is unique among human glycosaminoglycans. All glycosaminoglycans stimulate the elastinolytic activity of cathepsin K at physiological plasma pH, but only heparin also increases the collagenolytic activity...
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2008) 411 (3): 507–514.
Published: 14 April 2008
... 2789 -Ile-Lys-Arg-Lys 2793 and Val 2817 -Glu-Arg-Lys 2820 , on the mouse laminin α1 G4 domain. ELISAs using synthetic peptides confirmed the involvement of the AG-73 site (2719–2729). This site overlaps extensively with laminin's heparin-binding site, and AChE was observed to compete with heparan...
Articles
Journal:
Biochemical Journal
Biochem J (2007) 404 (1): 131–140.
Published: 26 April 2007
...Ivan Alfano; Parvez Vora; Rosemary S. Mummery; Barbara Mulloy; Christopher C. Rider GDNF (glial cell-line-derived neurotrophic factor), and the closely related cytokines artemin and neurturin, bind strongly to heparin. Deletion of a basic amino-acid-rich sequence of 16 residues N-terminal...
Articles
Journal:
Biochemical Journal
Biochem J (2006) 399 (2): 191–198.
Published: 27 September 2006
...Marco Guerrini; Sara Guglieri; Daniela Beccati; Giangiacomo Torri; Christian Viskov; Pierre Mourier The present study deals with the conformation in solution of two heparin octasaccharides containing the pentasaccharide sequence GlcN NAc,6S -GlcA-GlcN NS,3,6S -IdoA 2S -GlcN NS,6S [AGA*IA; where...
Articles
Boran Altincicek, Aya Shibamiya, Heidi Trusheim, Eleni Tzima, Michael Niepmann, Dietmar Linder, Klaus T. Preissner, Sandip M. Kanse
Journal:
Biochemical Journal
Biochem J (2006) 394 (3): 687–692.
Published: 24 February 2006
... autoactivation in the presence of polyanionic macromolecules such as heparin and RNA. Competition experiments suggest that RNA and heparin bind to the same or overlapping interaction sites. A proteolysis approach, where FSAP was hydrolysed into smaller fragments, was used to identify the polyanion-binding site...
Includes: Supplementary data
Articles
Nicholas J. Harmer, Christopher J. Robinson, Lucy E. Adam, Leopold L. Ilag, Carol V. Robinson, John T. Gallagher, Tom L. Blundell
Journal:
Biochemical Journal
Biochem J (2006) 393 (3): 741–748.
Published: 13 January 2006
..., multimers of the minimal complex composed of two FGF1 and two FGFR2 protomers can form on a single chain of the co-receptor heparin. Using size-exclusion chromatography, we show that two complexes can form on heparin chains as small as 16 saccharide units. We also show by MS that discrete complexes...
Articles
Journal:
Biochemical Journal
Biochem J (2005) 391 (1): 51–57.
Published: 26 September 2005
... cells are activated. In the present study, we report that ADA2 is a heparin-binding protein. This allowed us to obtain a highly purified enzyme and to study its biochemistry. ADA2 was identified as a member of a new class of ADGFs (ADA-related growth factors), which is present in almost all organisms...
Articles
Journal:
Biochemical Journal
Biochem J (2005) 391 (1): 125–134.
Published: 26 September 2005
... at inflammatory foci. 1 To whom correspondence should be addressed (email [email protected] ). 18 4 2005 1 6 2005 3 6 2005 3 6 2005 The Biochemical Society, London 2005 glycosaminoglycan heparan sulphate heparin hypochlorite myeloperoxidase oxidation TNB (5...
Includes: Supplementary data
Articles
Yutaka Furutani, Ri-ichiroh Manabe, Ko Tsutsui, Tomiko Yamada, Nagisa Sugimoto, Shiro Fukuda, Jun Kawai, Nobuo Sugiura, Koji Kimata, Yoshihide Hayashizaki, Kiyotoshi Sekiguchi
Journal:
Biochemical Journal
Biochem J (2005) 389 (3): 675–684.
Published: 26 July 2005
... was selectively expressed in the outer segment of photoreceptor cells and photomedin-2 was expressed in all retinal neurons. Among a panel of ECM components, including glycosaminoglycans, photomedins preferentially bound to chondroitin sulphate-E and heparin. These results, together, indicate that photomedins...
Articles
Journal:
Biochemical Journal
Biochem J (2005) 385 (2): 451–459.
Published: 07 January 2005
... Databases under accession number AY574375. 28 5 2004 21 7 2004 10 8 2004 10 8 2004 The Biochemical Society, London 2005 heparan sulphate heparin herpes simplex virus (HSV) sulphotransferase viral entry Heparan sulphate (HS) is a highly sulphated and unbranched...
Articles
Journal:
Biochemical Journal
Biochem J (2004) 382 (3): 933–943.
Published: 07 September 2004
...Hironobu YAMASHITA; Akira GOTO; Tatsuhiko KADOWAKI; Yasuo KITAGAWA We have previously shown that the LG4 (laminin G-like) domain of the laminin α4 chain is responsible for the significantly higher affinity of the α4 chain to heparin than found for other α chains [Yamaguchi, Yamashita, Mori, Okazaki...
Articles
Journal:
Biochemical Journal
Biochem J (2003) 373 (1): 241–249.
Published: 01 July 2003
...David BERRY; Zachary SHRIVER; Barbara NATKE; Chi-Pong KWAN; Ganesh VENKATARAMAN; Ram SASISEKHARAN Fibroblast growth factor (FGF) signalling is involved in a wide range of important biological activities with differential effects in various cell types. The activity of FGF is modulated by heparin...
Articles
Emanuel SMEDS, Hiroko HABUCHI, Anh-Tri DO, Eva HJERTSON, Helena GRUNDBERG, Koji KIMATA, Ulf LINDAHL, Marion KUSCHE-GULLBERG
Journal:
Biochemical Journal
Biochem J (2003) 372 (2): 371–380.
Published: 01 June 2003
... Society, London ©2003 2003 antithrombin glycosaminoglycan glucosaminyl 6-O-sulphotransferase heparan sulphate heparin O-sulphation Biochem. J. (2003) 372, 371 380 (Printed in Great Britain) 371 Substrate specificities of mouse heparan sulphate glucosaminyl 6-O-sulphotransferases Emanuel...
Articles
Journal:
Biochemical Journal
Biochem J (2002) 368 (1): 81–90.
Published: 15 November 2002
..., hyaluronic acid, and heparin. rPrP binding to GAGs occurs via the N-terminus, a region known to bind divalent cations. Additionally, rPrP binding to GAGs is enhanced in the presence of Cu 2+ and Zn 2+ , but not Ca 2+ and Mn 2+ . rPrP binds heparin strongest, and the binding is inhibited by certain heparin...
Articles
Journal:
Biochemical Journal
Biochem J (2001) 358 (3): 737–745.
Published: 10 September 2001
... for the same site on the surface of HEK-293 cells expressing the CCR2b chemokine receptor. The interaction between either chemokine species and endothelial cell surface GAGs was antagonized by the addition of the heparan sulphate-like molecule, heparin. Both MCP-1 and MCP-1–SEAP induced a Ca 2+ -flux...
Articles
Journal:
Biochemical Journal
Biochem J (2000) 347 (2): 469–473.
Published: 10 April 2000
... or imidazole, indicating that the imidazole ring is not sufficient for recognition by TSP1. Heparin was a potent inhibitor of binding with a K i of 50 nM, suggesting that the heparin-binding domain of TSP1 may be involved in this interaction. This was confirmed by the ability of a recombinant heparin-binding...
Articles
Yoshihiko URATANI, Keiko TAKIGUCHI-HAYASHI, Nobuhiko MIYASAKA, Michio SATO, Ming-hao JIN, Yasuyoshi ARIMATSU
Journal:
Biochemical Journal
Biochem J (2000) 346 (3): 817–826.
Published: 07 March 2000
... released latexin from the granules, suggesting that latexin is non-covalently associated with a heparin-like component of the granules. MCCPA and histamine were released from the mast cells after non-immunological and immunological stimulation with compound 48/80, A23187 and anti-IgE antibody, whereas...
Articles
Journal:
Biochemical Journal
Biochem J (1999) 344 (3): 723–730.
Published: 08 December 1999
... with a mixture of heparin lyases followed by high-resolution capillary electrophoresis, showed that they differed primarily by degree of sulphation. The most highly sulphated proteoglycan isolated had a disaccharide composition similar to heparan sulphate glycosaminoglycans found in brain tissue. Based...
Articles
Journal:
Biochemical Journal
Biochem J (1999) 343 (1): 45–52.
Published: 24 September 1999
...) P 3 and stimulated [ 3 H]Ins P accumulation in the presence of Li + . In contrast, LPA failed to stimulate detectable phosphoinositide turnover. Chronic down-regulation of Ins(1,4,5) P 3 receptor (Ins P 3 R) proteins with MCh did not affect Ca 2+ responses to LPA. In addition, heparin, a competitive...
Articles
Journal:
Biochemical Journal
Biochem J (1999) 342 (2): 361–368.
Published: 24 August 1999
... heparanase, which cleaves heparan sulphate (HS), an important structural component of the vascular BL. Previously, tumour-derived heparanase activity (which has been shown to be related to the metastatic potential of murine and human melanoma cell lines) was reported to cleave HS and be inhibited by heparin...
Articles
Journal:
Biochemical Journal
Biochem J (1999) 340 (1): 59–67.
Published: 10 May 1999
... upon phospholipid binding. These results highlight the importance of assessing the determinants of the interaction of β 2 GPI with anionic phospholipids assembled in unilamellar vesicles. heparin protein binding protein structure vesicles 1 To whom correspondence should be addressed (e...