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Keywords: metabolic flux
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Articles
Journal:
Biochemical Journal
Biochem J (2010) 432 (2): 399–406.
Published: 12 November 2010
...@stanford.edu ). 6 7 2010 9 9 2010 20 9 2010 20 9 2010 © The Authors Journal compilation © 2010 Biochemical Society 2010 Förster resonance energy transfer (FRET) hexose transport metabolic flux microfluidic platform starvation Cellular metabolite levels have...
Abstract
Precise and dynamic measurement of intracellular metabolite levels has been hampered by difficulties in differentiating between adsorbed and imported fractions and the subcellular distribution between cytosol, endomembrane compartments and mitochondria. In the present study, genetically encoded FRET (Förster resonance energy transfer)-based sensors were deployed for dynamic measurements of free cytosolic glucose and ATP with varying external supply and in glucose-transport mutants. Moreover, by using the FRET sensors in a microfluidic platform, we were able to monitor in vivo changes of intracellular free glucose in individual yeast cells. We demonstrate the suitability of the FRET sensors for gaining physiological insight by demonstrating that free intracellular glucose and ATP levels are reduced in a hxt5 Δ hexose-transporter mutant compared with wild-type and other hxt Δ strains.
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2010) 428 (2): 255–267.
Published: 13 May 2010
... Society 2010 metabolic flux mitochondrion phosphoinositide 3-kinase (PI3K) platelet-derived growth factor (PDGF) proliferation vascular smooth muscle cell (VSMC) VSMC (vascular smooth muscle cell) proliferation stimulated by PDGF (platelet-derived growth factor) is instrumental in the...
Abstract
Abnormal smooth muscle cell proliferation is a hallmark of vascular disease. Although growth factors are known to contribute to cell hyperplasia, the changes in metabolism associated with this response, particularly mitochondrial respiration, remain unclear. Given the increased energy requirements for proliferation, we hypothesized that PDGF (platelet-derived growth factor) would stimulate glycolysis and mitochondrial respiration and that this elevated bioenergetic capacity is required for smooth muscle cell hyperplasia. To test this hypothesis, cell proliferation, glycolytic flux and mitochondrial oxygen consumption were measured after treatment of primary rat aortic VSMCs (vascular smooth muscle cells) with PDGF. PDGF increased basal and maximal rates of glycolytic flux and mitochondrial oxygen consumption; enhancement of these bioenergetic pathways led to a substantial increase in the mitochondrial reserve capacity. Interventions with the PI3K (phosphoinositide 3-kinase) inhibitor LY-294002 or the glycolysis inhibitor 2-deoxy- D -glucose abrogated PDGF-stimulated proliferation and prevented augmentation of glycolysis and mitochondrial reserve capacity. Similarly, when L -glucose was substituted for D -glucose, PDGF-dependent proliferation was abolished, as were changes in glycolysis and mitochondrial respiration. Interestingly, LDH (lactate dehydrogenase) protein levels and activity were significantly increased after PDGF treatment. Moreover, substitution of L -lactate for D -glucose was sufficient to increase mitochondrial reserve capacity and cell proliferation after treatment with PDGF; these effects were inhibited by the LDH inhibitor oxamate. These results suggest that glycolysis, by providing substrates that enhance the mitochondrial reserve capacity, plays an essential role in PDGF-induced cell proliferation, underscoring the integrated metabolic response required for proliferation of VSMCs in the diseased vasculature.
Includes: Supplementary data
Articles
Journal:
Biochemical Journal
Biochem J (2008) 409 (1): 27–41.
Published: 11 December 2007
... control metabolic flux metabolomics plant metabolic network subcellular compartmentation Traditionally, the values for the kinetic parameters of enzymes used in such models have been drawn from the enzymology literature. Enzymes are purified from plant tissues or recombinant enzymes are...
Abstract
Research into plant metabolism has a long history, and analytical approaches of ever-increasing breadth and sophistication have been brought to bear. We now have access to vast repositories of data concerning enzymology and regulatory features of enzymes, as well as large-scale datasets containing profiling information of transcripts, protein and metabolite levels. Nevertheless, despite this wealth of data, we remain some way off from being able to rationally engineer plant metabolism or even to predict metabolic responses. Within the past 18 months, rapid progress has been made, with several highly informative plant network interrogations being discussed in the literature. In the present review we will appraise the current state of the art regarding plant metabolic network analysis and attempt to outline what the necessary steps are in order to further our understanding of network regulation.