... cavity surface of the chaperonin GroEL. 1 email [email protected] 20 9 2013 © The Authors Journal compilation © 2013 Biochemical Society 2013 conformational selection encounter complex induced fit macromolecular assembly protein–DNA interaction sparsely populated state...

..., in some cases with submolecular resolution. In the present review, we discuss a few of the most important recent developments in this field and how they might be applied to studying protein–protein and protein–DNA interactions or in the context of ultra-fast DNA sequencing. 1 These authors...

... correspondence should be addressed (email [email protected] ). 13 1 2012 © The Authors Journal compilation © 2012 Biochemical Society 2012 chromatin structure DNA repair nucleosome positioning nucleosome structure protein–DNA interaction Eukaryotic chromatin has been the subject...

... [email protected] ). 24 7 2009 © The Authors Journal compilation © 2010 Biochemical Society 2010 bacteriophage excision φC31 integrase integration protein–DNA interaction protein–protein interaction serine recombinase After infection of a sensitive host cell, temperate...

..., separating the donor and recipient molecules, but now with each product circle containing a copy of the transposon. crossover site DNA-bending protein protein–DNA interaction recombination serine recombinase synaptosome Sin and the Tn 3 /γδ transposon resolvases are so closely related...

..., the challenge to understand how the individual genes are regulated within the cell remains. Here, I provide an overview of current computational methods to investigate transcriptional regulation. I will first discuss how representing protein–DNA interactions as a network provides us with a conceptual framework...

... of ALEX to the study of protein–nucleic acid interactions. alternating-laser excitation (ALEX) biomolecular interaction fluorescence resonance energy transfer (FRET) protein–DNA interaction single-molecule fluorescence total internal reflection fluorescence (TIRF) Combination of ALEX...

... arginine repressor bacteria protein–DNA interaction thermophile transcription Abbreviations used: ArgR, arginine repressor; wHTH, winged helix-turn-helix. 310 Biochemical Society Transactions (2004) Volume 32, part 2 Arginine regulation in Thermotoga neapolitana and Thermotoga maritima D...