HAPE (high-altitude pulmonary oedema) is characterized by pulmonary hypertension, vasoconstriction and an imbalance in oxygen-sensing redox switches. Excess ROS (reactive oxygen species) contribute to endothelial damage under hypobaric hypoxia, hence the oxidative-stress-related genes CYBA (cytochrome b−245 α polypeptide) and GSTP1 (glutathione transferase Pi 1) are potential candidate genes for HAPE. In the present study, we investigated the polymorphisms −930A/G and H72Y (C/T) of CYBA and I105V (A/G) and A114V (C/T) of GSTP1, individually and in combination, in 150 HAPE-p (HAPE patients), 180 HAPE-r (HAPE-resistant lowland natives) and 180 HLs (healthy highland natives). 8-Iso-PGF2α (8-iso-prostaglandin F2α) levels were determined in plasma and were correlated with individual alleles, genotype, haplotype and gene–gene interactions. The relative expression of CYBA and GSTP1 were determined in peripheral blood leucocytes. The genotype distribution of −930A/G, H72Y (C/T) and I105V (A/G) differed significantly in HAPE-p compared with HAPE-r and HLs (P≤0.01). The haplotypes G-C of −930A/G and H72Y (C/T) in CYBA and G-C and G-T of I105V (A/G) and A114V (C/T) in GSTP1 were over-represented in HAPE-p; in contrast, haplotypes A-T of −930A/G and H72Y (C/T) in CYBA and A-C of I105V (A/G) and A114V (C/T) in GSTP1 were over-represented in HAPE-r and HLs. 8-Iso-PGF2α levels were significantly higher in HAPE-p and in HLs than in HAPE-r (P=2.2×10−16 and 1.2×10−14 respectively) and the expression of CYBA and GSTP1 varied differentially (P<0.05). Regression analysis showed that the risk alleles G, C, G and T of −930A/G, H72Y (C/T), I105V (A/G) and A114V (C/T) were associated with increased 8-iso-PGF2α levels (P<0.05). Interaction between the two genes revealed over-representation of most of the risk-allele-associated genotype combinations in HAPE-p and protective-allele-associated genotype combinations in HLs. In conclusion, the risk alleles of CYBA and GSTP1, their haplotypes and gene–gene interactions are associated with imbalanced oxidative stress and, thereby, with high-altitude adaptation and mal-adaptation.
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Research Article|
November 22 2011
CYBA and GSTP1 variants associate with oxidative stress under hypobaric hypoxia as observed in high-altitude pulmonary oedema
Aastha Mishra;
Aastha Mishra
*Institute of Genomics and Integrative Biology, Delhi, India
†Department of Biotechnology, University of Pune, Pune, India
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Zahara Ali;
Zahara Ali
*Institute of Genomics and Integrative Biology, Delhi, India
†Department of Biotechnology, University of Pune, Pune, India
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Arpana Vibhuti;
Arpana Vibhuti
*Institute of Genomics and Integrative Biology, Delhi, India
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Rahul Kumar;
Rahul Kumar
*Institute of Genomics and Integrative Biology, Delhi, India
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Perwez Alam;
Perwez Alam
*Institute of Genomics and Integrative Biology, Delhi, India
†Department of Biotechnology, University of Pune, Pune, India
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Rekhbala Ram;
Rekhbala Ram
*Institute of Genomics and Integrative Biology, Delhi, India
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Tashi Thinlas;
Tashi Thinlas
‡Department of Medicine, Sonam Norboo Memorial Hospital, Leh, Ladakh, Jamu & Kashmir, India
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Ghulam Mohammad;
Ghulam Mohammad
‡Department of Medicine, Sonam Norboo Memorial Hospital, Leh, Ladakh, Jamu & Kashmir, India
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M. A. Qadar Pasha
*Institute of Genomics and Integrative Biology, Delhi, India
Correspondence: Dr M. A. Qadar Pasha (email qpasha@igib.res.in).
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Clin Sci (Lond) (2012) 122 (6): 299–311.
Article history
Received:
April 19 2011
Revision Received:
September 19 2011
Accepted:
October 06 2011
Accepted Manuscript online:
October 06 2011
Citation
Aastha Mishra, Zahara Ali, Arpana Vibhuti, Rahul Kumar, Perwez Alam, Rekhbala Ram, Tashi Thinlas, Ghulam Mohammad, M. A. Qadar Pasha; CYBA and GSTP1 variants associate with oxidative stress under hypobaric hypoxia as observed in high-altitude pulmonary oedema. Clin Sci (Lond) 1 March 2012; 122 (6): 299–311. doi: https://doi.org/10.1042/CS20110205
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