Intrinsically disordered protein regions (IDRs) — regions that do not fold into a fixed three-dimensional structure but instead exist in a heterogeneous ensemble of conformations — have recently entered mainstream cell biology in the context of liquid–liquid phase separation (LLPS). IDRs are frequently found to be enriched in phase-separated compartments. Due to this observation, the presence of an IDR in a protein is frequently assumed to be diagnostic of its ability to phase separate. In this review, we clarify the role of IDRs in biological assembly and explore the physical principles through which amino acids can confer the attractive molecular interactions that underlie phase separation. While some disordered regions will robustly drive phase separation, many others will not. We emphasize that rather than ‘disorder' driving phase separation, multivalency drives phase separation. As such, whether or not a disordered region is capable of driving phase separation will depend on the physical chemistry encoded within its amino acid sequence. Consequently, an in-depth understanding of that physical chemistry is a prerequisite to make informed inferences on how and why an IDR may be involved in phase separation or, more generally, in protein-mediated intermolecular interactions.
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December 2020
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Arginine-rich dipeptide repeat proteins (R-DPRs) disrupt various phase-separated compartments in neurodegenerative disease. In this special Phase Transitions issue of Emerging Topics in Life Sciences, Odeh and Shorter discuss the therapeutic strategies utilised to combat the deleterious effects of R-DPRs. These include the use of small molecule inhibitors, antisense oligonucleotides (ASOs), antibody immunotherapy (anti-DPRs), and “bait” RNAs. Find out more on pages 293–305.
Review Article|
October 20 2020
Intrinsically disordered protein regions and phase separation: sequence determinants of assembly or lack thereof
In Collection
Protein structure and function
Erik W. Martin;
Erik W. Martin
1Department of Structural Biology, St. Jude Children's Research Hospital, 262 Danny Thomas Place, Memphis, TN 38105, U.S.A.
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Alex S. Holehouse
2Department of Biochemistry and Molecular Biophysics, Washington University School of Medicine, 660 S. Euclid Ave., St. Louis, MO 63110, U.S.A.
3Center for Science and Engineering of Living Systems (CSELS), Washington University in St. Louis, St. Louis, MO 63130, U.S.A.
Correspondence: Alex S. Holehouse ([email protected])
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Publisher: Portland Press Ltd
Received:
June 26 2020
Revision Received:
September 23 2020
Accepted:
September 28 2020
Online ISSN: 2397-8562
Print ISSN: 2397-8554
© 2020 The Author(s). Published by Portland Press Limited on behalf of the Biochemical Society and the Royal Society of Biology
2020
Emerg Top Life Sci (2020) 4 (3): 307–329.
Article history
Received:
June 26 2020
Revision Received:
September 23 2020
Accepted:
September 28 2020
Citation
Erik W. Martin, Alex S. Holehouse; Intrinsically disordered protein regions and phase separation: sequence determinants of assembly or lack thereof. Emerg Top Life Sci 11 December 2020; 4 (3): 307–329. doi: https://doi.org/10.1042/ETLS20190164
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