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Articles

Analytical methods for quantitating sulfate in plasma and serum

Open Access
Prasidhee Vijayakumar, Paul A. Dawson
Journal: Essays in Biochemistry
Essays Biochem (2024) 68 (4): 383–389.
https://doi.org/10.1042/EBC20230092
Published: 04 December 2024
View article titled, Analytical methods for quantitating sulfate in plasma and serum
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Articles

Quantification of persulfidation on specific proteins: are we nearly there yet?

Open Access
Hongling Liu, Florentina Negoita, Matthew Brook, Kei Sakamoto, Nicholas M. Morton
Journal: Essays in Biochemistry
Essays Biochem (2024) 68 (4): 467–478.
https://doi.org/10.1042/EBC20230095
Published: 04 December 2024
View article titled, Quantification of persulfidation on specific proteins: are we nearly there yet?
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Articles

Does AMPK bind glycogen in skeletal muscle or is the relationship correlative?

Open Access
Barnaby P. Frankish, Robyn M. Murphy
Journal: Essays in Biochemistry
Essays Biochem (2024) 68 (3): 337–347.
https://doi.org/10.1042/EBC20240006
Published: 18 November 2024
View article titled, Does AMPK bind glycogen in skeletal muscle or is the relationship correlative?
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Articles

A special issue of Essays in Biochemistry on AMPK and AMPK-related kinases

Open Access
Ian P. Salt, David Carling
Journal: Essays in Biochemistry
Essays Biochem (2024) 68 (3): 269–271.
https://doi.org/10.1042/EBC20240038
Published: 18 November 2024
View article titled, A special issue of Essays in Biochemistry on AMPK and AMPK-related kinases
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Articles

Malate dehydrogenase in parasitic protozoans: roles in metabolism and potential therapeutic applications

Open Access
Amy L. Springer, Swati Agrawal, Eric P. Chang
Journal: Essays in Biochemistry
Essays Biochem (2024) 68 (2): 235–251.
https://doi.org/10.1042/EBC20230075
Published: 03 October 2024
View article titled, Malate dehydrogenase in parasitic protozoans: roles in metabolism and potential therapeutic applications
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Articles

Computational methods for processing and interpreting mass spectrometry-based metabolomics

Open Access
Leonardo Perez de Souza, Alisdair R. Fernie
Journal: Essays in Biochemistry
Essays Biochem (2024) 68 (1): 5–13.
https://doi.org/10.1042/EBC20230019
Published: 30 April 2024
View article titled, Computational methods for processing and interpreting mass spectrometry-based metabolomics
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Articles

The use of immunoaffinity purification approaches coupled with LC-MS/MS offers a powerful strategy to identify protein complexes in filamentous fungi

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Ingo Bauer, Özlem Sarikaya Bayram, Özgür Bayram
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (5): 877–892.
https://doi.org/10.1042/EBC20220253
Published: 13 September 2023
View article titled, The use of immunoaffinity purification approaches coupled with LC-MS/MS offers a powerful strategy to identify protein complexes in filamentous fungi
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Articles

N-glycan breakdown by bacterial CAZymes

Open Access
Lucy I. Crouch
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (3): 373–385.
https://doi.org/10.1042/EBC20220256
Published: 18 April 2023
View article titled, N-glycan breakdown by bacterial CAZymes
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Articles

Hemicellulolytic enzymes in lignocellulose processing

Open Access
Heidi Østby, Anikó Várnai
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (3): 533–550.
https://doi.org/10.1042/EBC20220154
Published: 18 April 2023
View article titled, Hemicellulolytic enzymes in lignocellulose processing
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Articles

A special issue of Essays in Biochemistry on current advances about CAZymes and their impact and key role in human health and environment

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Mirjam Czjzek, Elizabeth Ficko-Blean, Jean-Guy Berrin
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (3): 325–329.
https://doi.org/10.1042/EBC20230004
Published: 18 April 2023
View article titled, A special issue of Essays in Biochemistry on current advances about CAZymes and their impact and key role in human health and environment
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Articles

A special issue of Essays in Biochemistry on structural mass spectrometry

Open Access
Hannah M. Britt, Rebecca Beveridge, Antonio N. Calabrese
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (2): 147–149.
https://doi.org/10.1042/EBC20230006
Published: 29 March 2023
View article titled, A special issue of Essays in Biochemistry on structural mass spectrometry
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Articles

Fundamentals of HDX-MS

Open Access
Vanesa Vinciauskaite, Glenn R. Masson
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (2): 301–314.
https://doi.org/10.1042/EBC20220111
Published: 29 March 2023
View article titled, Fundamentals of HDX-MS
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Articles

Seeing the complete picture: proteins in top-down mass spectrometry

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Tanja Habeck, Frederik Lermyte
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (2): 283–300.
https://doi.org/10.1042/EBC20220098
Published: 29 March 2023
View article titled, Seeing the complete picture: proteins in top-down mass spectrometry
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Articles

Mass spectrometric insights into protein aggregation

Open Access
Tara L. Pukala
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (2): 243–253.
https://doi.org/10.1042/EBC20220103
Published: 29 March 2023
View article titled, Mass spectrometric insights into protein aggregation
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Articles

Developments in rapid hydrogen–deuterium exchange methods

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Vimanda Chow, Esther Wolf, Cristina Lento, Derek J. Wilson
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (2): 165–174.
https://doi.org/10.1042/EBC20220174
Published: 29 March 2023
View article titled, Developments in rapid hydrogen–deuterium exchange methods
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Articles

Protein–RNA interactions: from mass spectrometry to drug discovery

Open Access
Benjamin Steinmetz, Izabela Smok, Maria Bikaki, Alexander Leitner
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (2): 175–186.
https://doi.org/10.1042/EBC20220177
Published: 29 March 2023
View article titled, Protein–RNA interactions: from mass spectrometry to drug discovery
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Articles

Hydrogen/deuterium exchange-mass spectrometry of integral membrane proteins in native-like environments: current scenario and the way forward

Open Access
Waqas Javed, Damon Griffiths, Argyris Politis
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (2): 187–200.
https://doi.org/10.1042/EBC20220173
Published: 29 March 2023
View article titled, Hydrogen/deuterium exchange-mass spectrometry of integral membrane proteins in native-like environments: current scenario and the way forward
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Articles

Functional benefit of structural disorder for the replication of measles, Nipah and Hendra viruses

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Frank Gondelaud, Giulia Pesce, Juliet F. Nilsson, Christophe Bignon, Denis Ptchelkine, Denis Gerlier, Cyrille Mathieu, Sonia Longhi
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (7): 915–934.
https://doi.org/10.1042/EBC20220045
Published: 16 December 2022
View article titled, Functional benefit of structural disorder for the replication of measles, Nipah and Hendra viruses
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Includes: Supplementary data
Articles

Shapeshifting proteins: the role of structural disorder and conformational plasticity in physiology and disease

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Samrat Mukhopadhyay
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (7): 817–819.
https://doi.org/10.1042/EBC20220197
Published: 16 December 2022
View article titled, Shapeshifting proteins: the role of structural disorder and conformational plasticity in physiology and disease
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Articles

CRISPR screening in cancer stem cells

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Bei Wang, Alan S.L. Wong
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (4): 305–318.
https://doi.org/10.1042/EBC20220009
Published: 16 September 2022
View article titled, CRISPR screening in cancer stem cells
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Articles

Case Study: Using H5P to design and deliver interactive laboratory practicals

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Amanda J. Unsworth, Mareike G. Posner
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (1): 19–27.
https://doi.org/10.1042/EBC20210057
Published: 29 April 2022
View article titled, Case Study: Using H5P to design and deliver interactive laboratory practicals
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Articles

Case study: Co-creating a flipped feed-in approach to a virtual biochemistry lab assessment: increasing student achievement and engagement in a large, diverse cohort

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Shabana Cassambai, Hannah Bridge, Palak K. Gill, Similoluwa Shobaloju, Tiziana Sgamma, Jo V. Rushworth
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (1): 29–37.
https://doi.org/10.1042/EBC20210051
Published: 29 April 2022
View article titled, Case study: Co-creating a flipped feed-in approach to a virtual biochemistry lab assessment: increasing student achievement and engagement in a large, diverse cohort
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Articles

Engagement with video content in the blended classroom

Open Access
David P. Smith, Nigel J. Francis
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (1): 5–10.
https://doi.org/10.1042/EBC20210055
Published: 29 April 2022
View article titled, Engagement with video content in the blended classroom
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Articles

Perspective on pros and cons of microlearning in health education

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Eser Yıldırım Sozmen
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (1): 39–44.
https://doi.org/10.1042/EBC20210047
Published: 29 April 2022
View article titled, Perspective on pros and cons of microlearning in health education
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Articles

Case Study: CRISPR 101 – a novel online learning course harnessing innovative ways to teach a complex biomolecular technology

Open Access
Martin Pal, Nicki Cranna, Marco J. Herold, Keely Bumsted O’Brien
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (1): 11–18.
https://doi.org/10.1042/EBC20220024
Published: 29 April 2022
View article titled, Case Study: CRISPR 101 – a novel online learning course harnessing innovative ways to teach a complex biomolecular technology
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Articles

Steroid receptor-coregulator transcriptional complexes: new insights from CryoEM

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Ping Yi, Xinzhe Yu, Zhao Wang, Bert W. O'Malley
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (6): 857–866.
https://doi.org/10.1042/EBC20210019
Published: 26 November 2021
View article titled, Steroid receptor-coregulator transcriptional complexes: new insights from CryoEM
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Articles

Principles of synthetic biology

Open Access
Kathryn L. Garner
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (5): 791–811.
https://doi.org/10.1042/EBC20200059
Published: 02 November 2021
View article titled, Principles of synthetic biology
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Articles

Halomonas as a chassis

Open Access
Jian-Wen Ye, Guo-Qiang Chen
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 393–403.
https://doi.org/10.1042/EBC20200159
Published: 26 July 2021
View article titled, Halomonas as a chassis
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Includes: Supplementary data
Articles

So you want to express your protein in Escherichia coli ?

Open Access
Aatir A. Tungekar, Angel Castillo-Corujo, Lloyd W. Ruddock
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 247–260.
https://doi.org/10.1042/EBC20200170
Published: 26 July 2021
View article titled, So you want to express your protein in Escherichia coli ?
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Articles

Production of proteins and commodity chemicals using engineered Bacillus subtilis platform strain

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Quanwei Zhang, Yaokang Wu, Mengyue Gong, Hongzhi Zhang, Yanfeng Liu, Xueqin Lv, Jianghua Li, Guocheng Du, Long Liu
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 173–185.
https://doi.org/10.1042/EBC20210011
Published: 26 July 2021
View article titled, Production of proteins and commodity chemicals using engineered Bacillus subtilis platform strain
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Articles

Microbial cell factories for the production of polyhydroxyalkanoates

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Dillirani Nagarajan, Ganies Riza Aristya, Yu-Ju Lin, Jui-Jen Chang, Hong-Wei Yen, Jo-Shu Chang
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 337–353.
https://doi.org/10.1042/EBC20200142
Published: 26 July 2021
View article titled, Microbial cell factories for the production of polyhydroxyalkanoates
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Articles

Biology on track: single-molecule visualisation of protein dynamics on linear DNA substrates

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Gurleen Kaur, Lisanne M. Spenkelink
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (1): 5–16.
https://doi.org/10.1042/EBC20200019
Published: 16 April 2021
View article titled, Biology on track: single-molecule visualisation of protein dynamics on linear DNA substrates
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Articles

Nanopores: a versatile tool to study protein dynamics

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In Collection
Protein structure and function
Sonja Schmid, Cees Dekker
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (1): 93–107.
https://doi.org/10.1042/EBC20200020
Published: 16 April 2021
View article titled, Nanopores: a versatile tool to study protein dynamics
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Articles

Biochemistry: one molecule at a time

Open Access
Dominika T. Gruszka
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (1): 1–3.
https://doi.org/10.1042/EBC20210015
Published: 16 April 2021
View article titled, Biochemistry: one molecule at a time
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Articles

Label-free, mass-sensitive single-molecule imaging using interferometric scattering microscopy

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Nikolas Hundt
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (1): 81–91.
https://doi.org/10.1042/EBC20200023
Published: 16 April 2021
View article titled, Label-free, mass-sensitive single-molecule imaging using interferometric scattering microscopy
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Articles

From folding to function: complex macromolecular reactions unraveled one-by-one with optical tweezers

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In Collection
Protein structure and function
Pétur O. Heidarsson, Ciro Cecconi
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (1): 129–142.
https://doi.org/10.1042/EBC20200024
Published: 16 April 2021
View article titled, From folding to function: complex macromolecular reactions unraveled one-by-one with optical tweezers
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Articles

Studying chromosome biology with single-molecule resolution in Xenopus laevis egg extracts

Open Access
George Cameron, Hasan Yardimci
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (1): 17–26.
https://doi.org/10.1042/EBC20200026
Published: 16 April 2021
View article titled, Studying chromosome biology with single-molecule resolution in Xenopus laevis egg extracts
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Articles

An emerging role of chromatin-interacting RNA-binding proteins in transcription regulation

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Xian Du, Rui Xiao
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (6): 907–918.
https://doi.org/10.1042/EBC20200004
Published: 07 December 2020
View article titled, An emerging role of chromatin-interacting RNA-binding proteins in transcription regulation
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Includes: Supplementary data
Articles

An introduction to the themed issue on RNA biology in China

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Zhe Wu
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (6): 863–866.
https://doi.org/10.1042/EBC20200031
Published: 07 December 2020
View article titled, An introduction to the themed issue on RNA biology in China
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Articles

Detection methods of epitranscriptomic mark N 6 -methyladenosine

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Ye Wang, Guifang Jia
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (6): 967–979.
https://doi.org/10.1042/EBC20200039
Published: 07 December 2020
View article titled, Detection methods of epitranscriptomic mark N 6 -methyladenosine
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Articles

Kinetochore–microtubule coupling mechanisms mediated by the Ska1 complex and Cdt1

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Amit Rahi, Manas Chakraborty, Kristen Vosberg, Dileep Varma
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (2): 337–347.
https://doi.org/10.1042/EBC20190075
Published: 26 August 2020
View article titled, Kinetochore–microtubule coupling mechanisms mediated by the Ska1 complex and Cdt1
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Articles

Phosphatidic acid: an emerging versatile class of cellular mediators

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Sang-Chul Kim, Xuemin Wang
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (3): 533–546.
https://doi.org/10.1042/EBC20190089
Published: 09 July 2020
View article titled, Phosphatidic acid: an emerging versatile class of cellular mediators
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Articles

Persulfides, at the crossroads between hydrogen sulfide and thiols

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Dayana Benchoam, Ernesto Cuevasanta, Matías N. Möller, Beatriz Alvarez
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (1): 155–168.
https://doi.org/10.1042/EBC20190049
Published: 04 February 2020
View article titled, Persulfides, at the crossroads between hydrogen sulfide and thiols
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Articles

Common modifications of selenocysteine in selenoproteins

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Elias S.J. Arnér
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (1): 45–53.
https://doi.org/10.1042/EBC20190051
Published: 23 December 2019
View article titled, Common modifications of selenocysteine in selenoproteins
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Articles

DNA methylation analysis for screening and diagnostic testing in neurodevelopmental disorders

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David E. Godler, David J. Amor
Journal: Essays in Biochemistry
Essays Biochem (2019) 63 (6): 785–795.
https://doi.org/10.1042/EBC20190056
Published: 07 November 2019
View article titled, DNA methylation analysis for screening and diagnostic testing in neurodevelopmental disorders
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Articles

Recombinant DNA technology and DNA sequencing

Open Access
Mark A. J. Roberts
Journal: Essays in Biochemistry
Essays Biochem (2019) 63 (4): 457–468.
https://doi.org/10.1042/EBC20180039
Published: 11 October 2019
View article titled, Recombinant DNA technology and DNA sequencing
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Includes: Supplementary data
Articles

Basement membrane collagens and disease mechanisms

Open Access
Anna Gatseva, Yuan Yan Sin, Gaia Brezzo, Tom Van Agtmael
Journal: Essays in Biochemistry
Essays Biochem (2019) 63 (3): 297–312.
https://doi.org/10.1042/EBC20180071
Published: 06 August 2019
View article titled, Basement membrane collagens and disease mechanisms
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Articles

Collagen-binding proteins: insights from the Collagen Toolkits

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Richard W. Farndale
Journal: Essays in Biochemistry
Essays Biochem (2019) 63 (3): 337–348.
https://doi.org/10.1042/EBC20180070
Published: 02 July 2019
View article titled, Collagen-binding proteins: insights from the Collagen Toolkits
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Articles

Using genetically incorporated unnatural amino acids to control protein functions in mammalian cells

Open Access
Alexander R. Nödling, Luke A. Spear, Thomas L. Williams, Louis Y.P. Luk, Yu-Hsuan Tsai
Journal: Essays in Biochemistry
Essays Biochem (2019) 63 (2): 237–266.
https://doi.org/10.1042/EBC20180042
Published: 15 May 2019
View article titled, Using genetically incorporated unnatural amino acids to control protein functions in mammalian cells
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TAPping into the treasures of tubulin using novel protein production methods

Open Access
Nuo Yu, Niels Galjart
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (6): 781–792.
https://doi.org/10.1042/EBC20180033
Published: 14 November 2018
View article titled, TAPping into the treasures of tubulin using novel protein production methods
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