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Articles

Computational methods for processing and interpreting mass spectrometry-based metabolomics

Leonardo Perez de Souza, Alisdair R. Fernie
Journal: Essays in Biochemistry
Essays Biochem (2023) EBC20230019.
https://doi.org/10.1042/EBC20230019
Published: 24 November 2023
View article titled, Computational methods for processing and interpreting mass spectrometry-based metabolomics
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Articles

Fungal siderophore metabolism with a focus on Aspergillus fumigatus : impact on biotic interactions and potential translational applications

Isidor Happacher, Mario Aguiar, Annie Yap, Clemens Decristoforo, Hubertus Haas
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (5): 829–842.
https://doi.org/10.1042/EBC20220252
Published: 13 September 2023
View article titled, Fungal siderophore metabolism with a focus on Aspergillus fumigatus : impact on biotic interactions and potential translational applications
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Articles

The role of methionine synthases in fungal metabolism and virulence

Jennifer Scott, Jorge Amich
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (5): 853–863.
https://doi.org/10.1042/EBC20230007
Published: 13 September 2023
View article titled, The role of methionine synthases in fungal metabolism and virulence
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Articles

Branched-chain amino acid biosynthesis in fungi

Joel T. Steyer, Richard B. Todd
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (5): 865–876.
https://doi.org/10.1042/EBC20230003
Published: 13 September 2023
View article titled, Branched-chain amino acid biosynthesis in fungi
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Articles

Mechanisms of bioleaching: iron and sulfur oxidation by acidophilic microorganisms

Sarah Jones, Joanne M. Santini
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (4): 685–699.
https://doi.org/10.1042/EBC20220257
Published: 11 August 2023
View article titled, Mechanisms of bioleaching: iron and sulfur oxidation by acidophilic microorganisms
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Articles

Oxidoreductases and metal cofactors in the functioning of the earth

Bruno Hay Mele, Maria Monticelli, Serena Leone, Deborah Bastoni, Bernardo Barosa, Martina Cascone, Flavia Migliaccio, Francesco Montemagno, Annarita Ricciardelli, Luca Tonietti, Alessandra Rotundi, Angelina Cordone, Donato Giovannelli
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (4): 653–670.
https://doi.org/10.1042/EBC20230012
Published: 11 August 2023
View article titled, Oxidoreductases and metal cofactors in the functioning of the earth
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Includes: Supplementary data
Articles

Butyrate-producing colonic clostridia: picky glycan utilization specialists

Maria Louise Leth, Michael Jakob Pichler, Maher Abou Hachem
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (3): 415–428.
https://doi.org/10.1042/EBC20220125
Published: 18 April 2023
View article titled, Butyrate-producing colonic clostridia: picky glycan utilization specialists
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Articles

Functions and specificity of bacterial carbohydrate sulfatases targeting host glycans

Ana S. Luis, Edwin A. Yates, Alan Cartmell
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (3): 429–442.
https://doi.org/10.1042/EBC20220120
Published: 18 April 2023
View article titled, Functions and specificity of bacterial carbohydrate sulfatases targeting host glycans
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Articles

A special issue in Essays in Biochemistry on astrocytes—more than a neuronal support network

Juan P. Bolaños
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (1): 1–2.
https://doi.org/10.1042/EBC20230005
Published: 03 March 2023
View article titled, A special issue in Essays in Biochemistry on astrocytes—more than a neuronal support network
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Articles

Astrocyte strategies in the energy-efficient brain

Irene Fernández-González, Elena Galea
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (1): 3–16.
https://doi.org/10.1042/EBC20220077
Published: 03 March 2023
View article titled, Astrocyte strategies in the energy-efficient brain
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Articles

Astrocytes as metabolic suppliers to support neuronal activity and brain functions

Hélène Roumes, Luc Pellerin, Anne-Karine Bouzier-Sore
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (1): 27–37.
https://doi.org/10.1042/EBC20220080
Published: 03 March 2023
View article titled, Astrocytes as metabolic suppliers to support neuronal activity and brain functions
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Articles

Mitochondrial Ca 2+ handling as a cell signaling hub: lessons from astrocyte function

João Victor Cabral-Costa, Alicia J. Kowaltowski
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (1): 63–75.
https://doi.org/10.1042/EBC20220094
Published: 03 March 2023
View article titled, Mitochondrial Ca 2+ handling as a cell signaling hub: lessons from astrocyte function
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Articles

Astroglial CB1 receptors, energy metabolism, and gliotransmission: an integrated signaling system?

Ignacio Fernández-Moncada, Giovanni Marsicano
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (1): 49–61.
https://doi.org/10.1042/EBC20220089
Published: 03 March 2023
View article titled, Astroglial CB1 receptors, energy metabolism, and gliotransmission: an integrated signaling system?
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Articles

Cross-talk between energy and redox metabolism in astrocyte-neuron functional cooperation

Angeles Almeida, Daniel Jimenez-Blasco, Juan P. Bolaños
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (1): 17–26.
https://doi.org/10.1042/EBC20220075
Published: 03 March 2023
View article titled, Cross-talk between energy and redox metabolism in astrocyte-neuron functional cooperation
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Articles

Astrocytes regulate inhibitory neurotransmission through GABA uptake, metabolism, and recycling

Jens V. Andersen, Arne Schousboe, Petrine Wellendorph
Journal: Essays in Biochemistry
Essays Biochem (2023) 67 (1): 77–91.
https://doi.org/10.1042/EBC20220208
Published: 03 March 2023
View article titled, Astrocytes regulate inhibitory neurotransmission through GABA uptake, metabolism, and recycling
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Articles

Lipids and the cancer stemness regulatory system in acute myeloid leukemia

Isabel N.X. Lim, Murtaza S. Nagree, Stephanie Z. Xie
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (4): 333–344.
https://doi.org/10.1042/EBC20220028
Published: 16 September 2022
View article titled, Lipids and the cancer stemness regulatory system in acute myeloid leukemia
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Articles

Perspective on pros and cons of microlearning in health education

Eser Yıldırım Sozmen
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (1): 39–44.
https://doi.org/10.1042/EBC20210047
Published: 29 April 2022
View article titled, Perspective on pros and cons of microlearning in health education
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Articles

Case study: Perspectives on the use of LEGO® bricks in the biochemistry classroom

Shane Austin, Crystal-Ann Millar, Sherena Christmas
Journal: Essays in Biochemistry
Essays Biochem (2022) 66 (1): 53–63.
https://doi.org/10.1042/EBC20210048
Published: 29 April 2022
View article titled, Case study: Perspectives on the use of LEGO® bricks in the biochemistry classroom
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Includes: Supplementary data
Articles

Nuclear receptor Nur77: its role in chronic inflammatory diseases

Sanne C. Lith, Carlie J.M. de Vries
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (6): 927–939.
https://doi.org/10.1042/EBC20210004
Published: 26 November 2021
View article titled, Nuclear receptor Nur77: its role in chronic inflammatory diseases
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Articles

Estrogen receptors and the aging brain

Silvia Maioli, Karin Leander, Per Nilsson, Ivan Nalvarte
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (6): 913–925.
https://doi.org/10.1042/EBC20200162
Published: 26 November 2021
View article titled, Estrogen receptors and the aging brain
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Articles

Mammalian lipids: structure, synthesis and function

Shamshad Cockcroft
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (5): 813–845.
https://doi.org/10.1042/EBC20200067
Published: 02 November 2021
View article titled, Mammalian lipids: structure, synthesis and function
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Articles

Metabolic engineering of Vibrio natriegens

Felix Thoma, Bastian Blombach
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 381–392.
https://doi.org/10.1042/EBC20200135
Published: 26 July 2021
View article titled, Metabolic engineering of Vibrio natriegens
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Articles

Escherichia coli as a platform microbial host for systems metabolic engineering

Dongsoo Yang, Cindy Pricilia Surya Prabowo, Hyunmin Eun, Seon Young Park, In Jin Cho, Song Jiao, Sang Yup Lee
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 225–246.
https://doi.org/10.1042/EBC20200172
Published: 26 July 2021
View article titled, Escherichia coli as a platform microbial host for systems metabolic engineering
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Articles

Established tools and emerging trends for the production of recombinant proteins and metabolites in Pichia pastoris

Sonakshi De, Diethard Mattanovich, Pau Ferrer, Brigitte Gasser
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 293–307.
https://doi.org/10.1042/EBC20200138
Published: 26 July 2021
View article titled, Established tools and emerging trends for the production of recombinant proteins and metabolites in Pichia pastoris
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Articles

Production of proteins and commodity chemicals using engineered Bacillus subtilis platform strain

Quanwei Zhang, Yaokang Wu, Mengyue Gong, Hongzhi Zhang, Yanfeng Liu, Xueqin Lv, Jianghua Li, Guocheng Du, Long Liu
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 173–185.
https://doi.org/10.1042/EBC20210011
Published: 26 July 2021
View article titled, Production of proteins and commodity chemicals using engineered Bacillus subtilis platform strain
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Articles

Towards robust Pseudomonas cell factories to harbour novel biosynthetic pathways

Nora Lisa Bitzenhofer, Luzie Kruse, Stephan Thies, Benedikt Wynands, Thorsten Lechtenberg, Jakob Rönitz, Ekaterina Kozaeva, Nicolas Thilo Wirth, Christian Eberlein, Karl-Erich Jaeger, Pablo Iván Nikel, Hermann J. Heipieper, Nick Wierckx, Anita Loeschcke
Journal: Essays in Biochemistry
Essays Biochem (2021) 65 (2): 319–336.
https://doi.org/10.1042/EBC20200173
Published: 26 July 2021
View article titled, Towards robust Pseudomonas cell factories to harbour novel biosynthetic pathways
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Articles

Lyso-glycosphingolipids: presence and consequences

Marco van Eijk, Maria J. Ferraz, Rolf G. Boot, Johannes M.F.G. Aerts
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (3): 565–578.
https://doi.org/10.1042/EBC20190090
Published: 18 August 2020
View article titled, Lyso-glycosphingolipids: presence and consequences
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Articles

The endocannabinoid system

Aruna Kilaru, Kent D. Chapman
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (3): 485–499.
https://doi.org/10.1042/EBC20190086
Published: 10 July 2020
View article titled, The endocannabinoid system
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Articles

Mike Wakelam: an appreciation

Bob Michell
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (3): 397–399.
https://doi.org/10.1042/EBC20200042
Published: 10 July 2020
View article titled, Mike Wakelam: an appreciation
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Articles

Oxidation of polyunsaturated fatty acids to produce lipid mediators

William W. Christie, John L. Harwood
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (3): 401–421.
https://doi.org/10.1042/EBC20190082
Published: 03 July 2020
View article titled, Oxidation of polyunsaturated fatty acids to produce lipid mediators
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Articles

Jasmonates: biosynthesis, perception and signal transduction

Gareth Griffiths
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (3): 501–512.
https://doi.org/10.1042/EBC20190085
Published: 30 June 2020
View article titled, Jasmonates: biosynthesis, perception and signal transduction
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Articles

Role of bioactive sphingolipids in physiology and pathology

Ana Gomez-Larrauri, Natalia Presa, Asier Dominguez-Herrera, Alberto Ouro, Miguel Trueba, Antonio Gomez-Muñoz
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (3): 579–589.
https://doi.org/10.1042/EBC20190091
Published: 24 June 2020
View article titled, Role of bioactive sphingolipids in physiology and pathology
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Articles

Dicarbonyl derived post-translational modifications: chemistry bridging biology and aging-related disease

Christian Sibbersen, Mogens Johannsen
Journal: Essays in Biochemistry
Essays Biochem (2020) 64 (1): 97–110.
https://doi.org/10.1042/EBC20190057
Published: 15 January 2020
View article titled, Dicarbonyl derived post-translational modifications: chemistry bridging biology and aging-related disease
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Articles

Integrating –omics data into genome-scale metabolic network models: principles and challenges

Charlotte Ramon, Mattia G. Gollub, Jörg Stelling
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (4): 563–574.
https://doi.org/10.1042/EBC20180011
Published: 12 October 2018
View article titled, Integrating –omics data into genome-scale metabolic network models: principles and challenges
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Articles

Assembly of mammalian oxidative phosphorylation complexes I–V and supercomplexes

Alba Signes, Erika Fernandez-Vizarra
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (3): 255–270.
https://doi.org/10.1042/EBC20170098
Published: 20 July 2018
View article titled, Assembly of mammalian oxidative phosphorylation complexes I–V and supercomplexes
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Articles

Neuroimaging in mitochondrial disorders

Mario Mascalchi, Martino Montomoli, Renzo Guerrini
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (3): 409–421.
https://doi.org/10.1042/EBC20170109
Published: 20 July 2018
View article titled, Neuroimaging in mitochondrial disorders
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Articles

Human diseases associated with defects in assembly of OXPHOS complexes

Daniele Ghezzi, Massimo Zeviani
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (3): 271–286.
https://doi.org/10.1042/EBC20170099
Published: 20 July 2018
View article titled, Human diseases associated with defects in assembly of OXPHOS complexes
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Articles

Coenzyme Q 10 deficiencies: pathways in yeast and humans

Agape M. Awad, Michelle C. Bradley, Lucía Fernández-del-Río, Anish Nag, Hui S. Tsui, Catherine F. Clarke
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (3): 361–376.
https://doi.org/10.1042/EBC20170106
Published: 06 July 2018
View article titled, Coenzyme Q 10 deficiencies: pathways in yeast and humans
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Articles

Biomarkers for mitochondrial energy metabolism diseases

Sara Boenzi, Daria Diodato
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (3): 443–454.
https://doi.org/10.1042/EBC20170111
Published: 06 July 2018
View article titled, Biomarkers for mitochondrial energy metabolism diseases
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Articles

Natural history of mitochondrial disorders: a systematic review

Nandaki Keshavan, Shamima Rahman
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (3): 423–442.
https://doi.org/10.1042/EBC20170108
Published: 06 July 2018
View article titled, Natural history of mitochondrial disorders: a systematic review
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Articles

Mitochondrial DNA replication: clinical syndromes

Mohammed Almannai, Ayman W. El-Hattab, Fernando Scaglia
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (3): 297–308.
https://doi.org/10.1042/EBC20170101
Published: 27 June 2018
View article titled, Mitochondrial DNA replication: clinical syndromes
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Articles

The mitochondrial DNA genetic bottleneck: inheritance and beyond

Haixin Zhang, Stephen P. Burr, Patrick F. Chinnery
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (3): 225–234.
https://doi.org/10.1042/EBC20170096
Published: 07 June 2018
View article titled, The mitochondrial DNA genetic bottleneck: inheritance and beyond
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Articles

Exosomes and extracellular vesicles: the path forward

Philip D. Stahl, Graça Raposo
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (2): 119–124.
https://doi.org/10.1042/EBC20170088
Published: 15 May 2018
View article titled, Exosomes and extracellular vesicles: the path forward
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Articles

Fed-EXosome: extracellular vesicles and cell–cell communication in metabolic regulation

In Collection
Awards
Isabella Samuelson, Antonio J. Vidal-Puig
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (2): 165–175.
https://doi.org/10.1042/EBC20170087
Published: 01 May 2018
View article titled, Fed-EXosome: extracellular vesicles and cell–cell communication in metabolic regulation
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Articles

Increasing metabolic potential: C-fixation

P. John Andralojc, Elizabete Carmo-Silva, Gustaf E. Degen, Martin A.J. Parry
Journal: Essays in Biochemistry
Essays Biochem (2018) 62 (1): 109–118.
https://doi.org/10.1042/EBC20170014
Published: 13 April 2018
View article titled, Increasing metabolic potential: C-fixation
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Articles

Autophagy’s secret life: secretion instead of degradation

Aurore Claude-Taupin, Jingyue Jia, Michal Mudd, Vojo Deretic
Journal: Essays in Biochemistry
Essays Biochem (2017) 61 (6): 637–647.
https://doi.org/10.1042/EBC20170024
Published: 12 December 2017
View article titled, Autophagy’s secret life: secretion instead of degradation
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Articles

Differential control of ageing and lifespan by isoforms and splice variants across the mTOR network

Patricia Razquin Navas, Kathrin Thedieck
Journal: Essays in Biochemistry
Essays Biochem (2017) 61 (3): 349–368.
https://doi.org/10.1042/EBC20160086
Published: 11 July 2017
View article titled, Differential control of ageing and lifespan by isoforms and splice variants across the mTOR network
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Articles

Native and engineered sensors for Ca 2+ and Zn 2+ : lessons from calmodulin and MTF1

Margaret C. Carpenter, Amy E. Palmer
Journal: Essays in Biochemistry
Essays Biochem (2017) 61 (2): 237–243.
https://doi.org/10.1042/EBC20160069
Published: 09 May 2017
View article titled, Native and engineered sensors for Ca 2+ and Zn 2+ : lessons from calmodulin and MTF1
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Articles

Overview: metabolomics and lipidomics in nutrition and metabolism research

Philip Newsholme
Journal: Essays in Biochemistry
Essays Biochem (2016) 60 (5): 407.
https://doi.org/10.1042/EBC20160047
Published: 15 December 2016
View article titled, Overview: metabolomics and lipidomics in nutrition and metabolism research
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Articles

Solution state nuclear magnetic resonance spectroscopy for biological metabolism and pathway intermediate analysis

Gareth L. Nealon, Mark J. Howard
Journal: Essays in Biochemistry
Essays Biochem (2016) 60 (5): 419–428.
https://doi.org/10.1042/EBC20160044
Published: 15 December 2016
View article titled, Solution state nuclear magnetic resonance spectroscopy for biological metabolism and pathway intermediate analysis
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